RegulonDB RegulonDB 10.8: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by IHF,- regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


IHF,- Regulatory phrases      

IHF,- phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
      flhDp
      nirBp
      micFp
      sodBp
      rpoEp1b
      nrfAp
      uspBp
      hptp
      dmsAp2
      acsp1
      ubiCp
      yiaJp
      osmEp
      hemFp
      norVp
      amiAp
      nuoAp2
      ndhp
      sodAp
    ompFp
    osmYp
    ompRp1
    ihfBp
    ilvLp1
    ihfAp4
      carAp1
      ompCp1
      nmpCp
      ompCp3
      fliAp1
      acsp2
      ssuEp
      glpTQp


IHF,- phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [OmpR,-,-145.5] [LrhA,-,-112.0] [OmpR,-,18.5] [CRP,+,-71.5] [AcrR,-,-31.5] [FliZ,-,12.0] [YjjQ,-,11.0] [RcsAB,-,11.0] [Fur,-,115.0] flhDp
  [IHF,+,-115.0] [Fis,-,-97.0,-142.0] [CRP,-,-296.5] [NarP,+,-65.0,-74.0] [NarL,+,-65.0,-74.0] [FNR,+,-41.5] [Cra,-,-15.5] [Fis,-,23.0] [CRP,-,-41.5] nirBp
  [SoxS,+,-119.5] [OmpR,+,-186.5,-206.5,-165.5] [SoxS,+,-38.5] [Rob,+,-40.0] [Lrp,-,27.5] [MarA,+,-40.0] [AcrR,-,41.0] [Lrp,-,87.5,122.0,58.5] micFp
  [NsrR,-,-37.0] [CRP,-,64.5] sodBp
  rpoEp1b
  [NsrR,-,-121.0] [IHF,+,-127.0] [NsrR,-,-63.0] [NarP,+,-70.0,-79.0] [NarL,+,-79.0,-50.0,-70.0] [FNR,+,-41.5] [NarL,-,-22.0,-50.0] [Fis,-,-15.0] nrfAp
  uspBp
  [CRP,+,-65.5] hptp
  [ModE,-,-5.0] dmsAp2
  [Fis,-,-61.0] acsp1
  [FNR,-,-0.5] ubiCp
  [YiaJ,-,-55.0] [CRP,-,50.5] yiaJp
  [Fis,-,26.0,-86.0,-31.0] osmEp
  hemFp
  [NorR,+,-132.0,-111.0] [FNR,-,-140.5] [IHF,+,-48.0] [NorR,+,-87.0] [NarP,-,-78.0,-69.0] [NarL,-,-69.0,-78.0] norVp
  amiAp
  [ArcA,-,-108.0] [NarL,+,-122.0] [FNR,-,-40.5] nuoAp2
  [Fis,+,-123.0] [FNR,-,-94.5] [PdhR,-,-35.0] [NsrR,-,6.0] [ArcA,-,-57.0] [Fis,+,-72.0] [FNR,-,-50.5] [ArcA,-,68.0,52.0,57.0,36.0,66.0] [Fis,-,51.0] ndhp
  [CRP,+,-99.5] [ArcA,-,-38.0,-10.0,-21.0] [SoxS,+,-44.0] [Rob,+,-40.5] [SoxR,+,9.0] [Fur,-,-30.0,-33.0,-42.0,-36.0] [MarA,+,-40.5] [FNR,-,-37.5] sodAp
  [OmpR,-,-370.5] [IHF,+,-108.0] [CpxR,-,-373.0,-429.5,-93.0] [CRP,+,-121.5] [OmpR,-,-50.5,-70.5] [CpxR,-,-68.5] [RstA,-,-92.0] [CRP,+,-52.5,-92.5] [OmpR,+,-90.5,-50.5,-70.5] ompFp
  [Lrp,-,-186.0,-149.0] [Fis,-,-10.0] [CRP,-,-12.5,1.5] [Fis,-,72.0] osmYp
  [CRP,-,-53.0] ompRp1
  ihfBp
  ilvLp1
  ihfAp4
  [PurR,-,-128.5] [IHF,+,-305.0] [RutR,+,-184.0] [Fis,+,-156.0,-103.0] [PepA,-,-173.0] [Fis,+,-81.0] [PepA,-,-79.0] carAp1
  [Lrp,-,-311.5,-280.5,-340.5,-376.0] [CpxR,+,-95.0,-134.0,-351.0] [OmpR,+,-67.5,-47.5,-88.5] [Lrp,-,2.0,-29.5] [YjjQ,-,-64.0] [Lrp,-,86.0,64.5] ompCp1
  [MprA,-,-161.0] [OmpR,-,-45.5] [CRP,+,-31.5,-73.5] nmpCp
  [Lrp,-,-319.0,-151.0,-283.5,-254.5,-223.5] [Lrp,-,28.0] [Lrp,-,143.0,121.5,59.0] ompCp3
  [NsrR,-,-207.0] [CsgD,-,-10.5] [NsrR,-,7.0] [FlhDC,+,-67.0,-38.0] fliAp1
  [CRP,+,-122.5] [Fis,-,-265.0,-98.0] [CRP,+,-69.5] [Fis,-,-59.0] acsp2
  [IHF,+,-177.0,-134.0] [Cbl,+,-54.5] [CysB,-,-18.0] ssuEp
  [CRP,+,-131.5] [Fis,+,-113.0,-166.0] [FNR,+,-131.5] [GlpR,-,-113.5,-172.5,-132.5] [CRP,+,-41.5,-91.5] [Fis,+,-16.0,-64.0,-71.0] [FNR,+,-91.5] [GlpR,-,-41.5,-81.5] [Fis,+,49.0] [GlpR,-,315.5,348.5,333.5] glpTQp

  

  

RegulonDB