RegulonDB RegulonDB 10.8: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by SoxS,+ regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


SoxS,+ Regulatory phrases      

SoxS,+ phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
      ptsGp1
      acrAp
      ribAp1
      decRp
      fldAp
      marRp
      uofp
      poxBp
      fprp
      tolCp4
      zwfp
      acnAp2
      sodAp
      nfsBp
      waaYp
      inaAp
      tolCp3
      acrZp
      pqiAp1
      pgip
      yrbLp
      nepIp
      fumCp
      ybjCp
      ydbKp
      fldBp
      nfop
    micFp
      aldAp


SoxS,+ phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [Fis,-,-119.0,-145.0] [CRP,+,-94.5] [Mlc,-,-6.0] [ArcA,-,-85.0,-48.0,2.0] [Fis,-,-80.0,3.0,-19.0] [CRP,+,-40.5] [Fis,+,-19.0,3.0] ptsGp1
  [AcrR,-,-22.5] [EnvR,-,-22.5] [MarA,+,-72.5] [MprA,-,-16.0] [PhoP,-,32.0] acrAp
  ribAp1
  [MarA,+,-65.0] decRp
  fldAp
  [AcrR,-,-40.5] [CpxR,+,-29.0] [MarR,-,17.0,-18.0] [MarA,+,-61.5] [Rob,+,-61.5] [CRP,+,-52.5] [Fis,+,-81.0] [Cra,-,-72.5] marRp
  [OxyR,+,-62.0,-40.0] uofp
  [MarA,+,-60.5] poxBp
  [MarA,+,-58.5] fprp
  [MarA,+,-52.5] [Rob,+,-52.5] tolCp4
  [MarA,+,-54.0] [Rob,+,-54.0] [Cra,-,-35.5] zwfp
  [ArcA,-,-34.0] [MarA,+,-51.5] [Rob,+,-51.5] [CRP,+,-40.5] [FNR,-,-40.5] acnAp2
  [CRP,+,-99.5] [ArcA,-,-38.0,-10.0,-21.0] [IHF,-,-48.0,-68.0,-24.0,-1.0] [MarA,+,-40.5] [Rob,+,-40.5] [FNR,-,-37.5] [SoxR,+,9.0] [Fur,-,-30.0,-33.0,-42.0,-36.0] sodAp
  [MarA,+,-43.5] [Rob,+,-43.5] nfsBp
  [MarA,+,-43.0] waaYp
  [MarA,+,-41.5] [Rob,+,-41.5] inaAp
  [MarA,+,-40.5] [Rob,+,-40.5] tolCp3
  [MarA,+,-40.5] [Rob,+,-40.5] acrZp
  [MarA,+,-42.5] pqiAp1
  pgip
  [BasR,-,-52.5] [PhoP,+,-28.0] [SoxR,+,36.0] yrbLp
  nepIp
  [CRP,?,-484.5] [MarA,+,-46.5] [CRP,+,-53.5] fumCp
  [OxyR,-,-50.0,-72.0] [MarA,+,-40.5] [Rob,+,-40.5] ybjCp
  ydbKp
  fldBp
  [MarA,+,-38.5] [Rob,+,-38.5] nfop
  [OmpR,+,-186.5,-206.5,-165.5] [Lrp,-,27.5] [IHF,-,-72.0] [MarA,+,-40.0] [Rob,+,-40.0] [AcrR,-,41.0] [Lrp,-,87.5,122.0,58.5] micFp
  [ArcA,-,-157.0,-137.0] [MarA,+,-161.0] [Rob,+,-161.0] [ArcA,-,2.0,-5.0,13.0] [DnaA,-,-7.5] [CRP,+,-59.5] [FNR,-,-10.5] aldAp

  

  

RegulonDB