RegulonDB RegulonDB 11.1:Regulon Page
   

Nac DNA-binding transcriptional dual regulator

Synonyms: Nac
Summary:
Nac, "Nitrogen assimilation control," regulates, without a coeffector, genes involved in nitrogen metabolism under nitrogen-limiting conditions [8]. The genes regulated by Nac are transcribed by RNA polymerase σ70. These genes are coupled to the nitrogen regulatory (Ntr) system, which is σ54 dependent, through Nac, whose transcription is activated by NtrC [8]. Using DNA microarray analyses, it was shown that Nac could affect the expression of 25 genes [4]. This transcriptional regulator is negatively autoregulated [8] and is expressed under nitrogen-limiting conditions [7]. Nac belongs to the LysR family [8] and features a helix-turn-helix motif located close to the N terminus [11].
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Transcription factor      
TF conformation(s):
Name Conformation Type TF-Effector Interaction Type Apo/Holo Conformation Evidence Confidence level (C: Confirmed, S: Strong, W: Weak) References
Nac Functional   nd nd nd
Evolutionary Family: LysR
TFBs length: 15
TFBs symmetry: inverted-repeat
Connectivity class: Local Regulator
Gene name: nac
  Genome position: 2061016-2061933
  Length: 918 bp / 305 aa
Operon name: nac
TU(s) encoding the TF:
Transcription unit        Promoter
nac
nacp


Regulon       
Regulated gene(s) asnC, codA, codB, feaR, gabD, gabP, gabT, gdhA, gltB, gltD, gltF, mioC, mnmG, nac, nupC, patD, serA, ydcS, ydcT, ydcU, ydcV
Multifun term(s) of regulated gene(s) MultiFun Term (List of genes associated to the multifun term)
membrane (5)
nitrogen metabolism (4)
Transcription related (3)
activator (3)
nucleotide and nucleoside conversions (3)
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Regulated operon(s) asnC-mioC-mnmG-rsmG, codBA, feaR, gdhA, glaH-lhgD-gabDTP, gltBDF, nac, nupC, serA, ydcSTUV-patD
First gene in the operon(s) asnC, codB, feaR, gabD, gdhA, gltB, nac, nupC, serA, ydcS
Simple and complex regulons AdiY,ArgR,CRP,FNR,Fur,GadE,HdfR,IHF,Lrp,Nac
ArgP,CRP,FNR,Fur,Nac
AsnC,Nac
CRP,CytR,Nac
CRP,Nac,NsrR,PhoB,QseB
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Simple and complex regulatory phrases Regulatory phrase (List of promoters regulated by the phrase)
[Nac,-](6)
[Nac,+](6)


Transcription factor regulation    


Transcription factor binding sites (TFBSs) arrangements
      

  Functional conformation Function Promoter Sigma factor Central Rel-Pos Distance to first Gene Genes Sequence LeftPos RightPos Evidence Confidence level (C: Confirmed, S: Strong, W: Weak) References
  Nac repressor asnCp Sigma70 -64.0 -92.0 asnC, mioC, mnmG
aaaccgacacACATGCAATAATCATtcaataaaaa
 3927088 3927102 [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] W [1], [1]
  Nac repressor asnCp Sigma70 -7.0 -35.0 asnC, mioC, mnmG
taaaaaagaaGGCTAAAATAGAATGaatcatcaat
 3927031 3927045 [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] W [1]
  Nac repressor asnCp Sigma70 16.0 -13.0 asnC, mioC, mnmG
atgaatcatcAATCCGCATAAGAAAatcctatgga
 3927009 3927023 [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-SEQ] S [1], [1], [2], [2]
  Nac activator codBp Sigma70 -58.0 -96.0 codB, codA
gcactcattcATATAAAAAATATATttccccacga
 354819 354833 [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-SEQ], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS], [EXP-IMP-SITE-MUTATION] C [2], [2], [3], [3], [4]
  Nac activator feaRp2 Sigma70 -32.5 -58.5 feaR
gtcaggctcaTTAGCTTCGTTTATTgcaacacaaa
 1447334 1447348 [COMP-HINF] W [5], [5]
  Nac activator gabDp Sigma38 -44.0 -145.0 gabD, gabT, gabP
cggcagcgacATCAGCAATTCCTATtggtgcgcat
 2791121 2791135 [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-SEQ] S [2], [2], [4], [6]
  Nac activator gabDp1 Sigma70 -44.0 -145.0 gabD, gabT, gabP
cggcagcgacATCAGCAATTCCTATtggtgcgcat
 2791121 2791135 [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-SEQ] S [2], [2], [4], [6]
  Nac repressor gdhAp Sigma70 -81.0 -144.0 gdhA
tcgcatttggTTATGAGATTACTCTcgttattaat
 1842220 1842234 [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] W [7]
  Nac repressor gdhAp Sigma70 -25.0 -88.0 gdhA
ttcttgcttaCCGTCACATTCTTGAtggtatagtc
 1842276 1842290 [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] W [7]
  Nac repressor gdhAp Sigma70 25.0 -39.0 gdhA
cacatgacatAAACAACATAAGCACaatcgtatta
 1842325 1842339 [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] W [7]
  Nac repressor gdhAp Sigma70 45.0 -19.0 gdhA
agcacaatcgTATTAATATATAAGGgttttatatc
 1842345 1842359 [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-SEQ] S [2], [2], [7]
  Nac repressor gltBp Sigma70 nd nd gltB, gltD, gltF
nd
 nd nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS] W [4]
  Nac repressor gltBp2 Sigma38 nd nd gltB, gltD, gltF
nd
 nd nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS] W [4]
  Nac repressor nacp Sigma54 -75.0 -120.0 nac
tgacgaatctATCATAATCTCTTATttgacagttg
 2062046 2062060 [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] S [8]
  Nac activator nupCp Sigma70 nd nd nupC
nd
 nd nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS] W [4]
  Nac repressor serAp1 Sigma70 -30.0 -76.0 serA
gcaaacgttcATATTGCCGCAATATtattttttga
 3058479 3058493 [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS] W [9], [9]
  Nac repressor serAp1 Sigma70 -19.0 -65.0 serA
tattgccgcaATATTATTTTTTGATatgttgaaag
 3058468 3058482 [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-SEQ] S [2], [2], [9], [9]
  Nac activator ydcSp1 Sigma38 -51.0 -106.0 ydcS, ydcT, ydcU, ydcV, patD
cacaacctgaATAAATTTTCTCAGGggcgaaggtg
 1511541 1511555 [EXP-IDA], [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA] W [10], [10]



High-throughput Transcription factor binding sites (TFBSs)
      

  Functional conformation Function Object name Object type Distance to first Gene Sequence LeftPos RightPos Center Position Growth Condition Evidence Confidence level (C: Confirmed, S: Strong, W: Weak) References
  Nac activator ybeQ Transcription-Unit nd
gcagataaaaCATATTATATTTTTATGTgttccatttt
676576 676593 676584.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator bssS Gene nd
ttcagtatacCAATAAGTAAGGGTATTCaccgaatttt
1121034 1121051 1121042.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ynjF Gene nd
gttgttgccgCCATCATTGAACGTGATGgcaaaatttt
1841515 1841532 1841523.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator gadE Gene nd
aaacacttgcCCCATAAGAATTCACAATtatgtttttc
3658688 3658705 3658696.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yhhQ Transcription-Unit nd
aaactcaacgCTATAAGGCGTTGTTCTGgttatcgtta
3609243 3609260 3609251.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator cysQ Transcription-Unit nd
aaagggagaaTAAACGTCTTACTTATAGaacagtgaag
4436611 4436628 4436619.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator wcaF Gene nd
cttaaatcttGCATTGGTTTTCCTTATAttcagacttt
2128885 2128902 2128893.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ynaK Gene nd
aaatggtatgGGATATGATTTTCTTACAtcatttgcaa
1425042 1425059 1425050.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yfgG Gene nd
aaattaacttCCATAACATTAAAATATGtatccactga
2629167 2629184 2629175.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator wrbA Gene nd
gtttttttaaTCATAAGAGCGGCTTATGgataattatt
1067886 1067903 1067894.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yqeH Gene nd
aatatctgctGTCATATATAATGATGATggtcttgatg
2987896 2987913 2987904.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ybjQ Gene nd
aatgatttccTTATAAGCGATCGCTCTGaaagcgttct
904478 904495 904486.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator metE Gene nd
aattcaaaatCCATAGGATTTACATATAattagaggaa
4013019 4013036 4013027.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator hcaR Gene nd
ctgagacgaaACATCGGTAATACTTTTGgcagtaaatt
2668563 2668580 2668571.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator bisC Transcription-Unit nd
atgccggaccATAAGCCTCACGAATGCGtttatgttgt
3716080 3716097 3716088.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ahpC Gene nd
acacggaggaAGTATAGATGTCCTTGATtaacaccaaa
638938 638955 638946.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yidQ Gene nd
acagatgaatTTATTATGATAAGAAATGtgttgttagc
3867723 3867740 3867731.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yicJ Gene nd
tgcgtgtattAGGCGGAAAAAACTGATCtgggggatgt
3836138 3836155 3836146.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ytfB Gene nd
atagcctatgAATAAGCTAACGCTATGAtgtccgtggt
4428762 4428779 4428770.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ydaU Gene nd
accgggcagcATCATACGGGGCAATTATggccgcatta
1421154 1421171 1421162.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator map Gene nd
tcttgattgaGATAGCCATTAATTCTGTccatcagcgt
189498 189515 189506.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator argU Gene nd
acgggttcggAGATAATCGATGGTTATGcgataatcat
564347 564364 564355.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator dcp Transcription-Unit nd
cgaggtgttcCATAGCGTAGGCTTACTGataacggagt
1627407 1627424 1627415.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ygiL Gene nd
acttatctttATATAAAGGAATATTATGtccgctttta
3185399 3185416 3185407.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ybjP Gene nd
aatgatttccTTATAAGCGATCGCTCTGaaagcgttct
904478 904495 904486.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ivy Transcription-Unit nd
agaataaattGATAACAAATGCTGATATtggaaatatc
240267 240284 240275.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator dadA Gene nd
agccagctcaCCATAAAAAAGCCGCATGttgaataata
1237472 1237489 1237480.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ycgV Transcription-Unit nd
tttttgtaatAATCCTAATTAGTTATGGgaatttcgct
1256267 1256284 1256275.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator eutS Gene nd
gcaaactcagTAATAAGCTTTACTAATAtattgcagct
2576022 2576039 2576030.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator selC Gene nd
aggaatacctGGTCTAAGGTTTTGTGATggacgatgag
3836409 3836426 3836417.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator torI Transcription-Unit nd
aggcgacctgCCAAAAGCCAAAGTTATCcacgggcgag
2476418 2476435 2476426.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator dhaR Gene nd
agggaaaagaAAATTAGCCCAAATTATGtttcatagtg
1250939 1250956 1250947.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator tnaC Gene nd
agtgcattatGAATATCTTACATATATGtgtgacctca
3888437 3888454 3888445.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator shoB Gene nd
gattaacagcGATAAGTGTACCGAATGCgtagggcact
2699768 2699785 2699776.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yjaH Transcription-Unit nd
ataaacacatTGTAAGGATAACTTATGAacaagactca
4200267 4200284 4200275.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator hupA Gene nd
ataaacacatTGTAAGGATAACTTATGAacaagactca
4200267 4200284 4200275.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ilvL Gene nd
atatcttgtaCTATTTACAAAACCTATGgtaactcttt
3950258 3950275 3950266.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ybcK Transcription-Unit nd
atattcattaATAAAAGCCATACTTATAgcacaaaggg
569295 569312 569303.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator cmtB Gene nd
atccgcggctGATAATGTCCGCTAATTGtttttctgat
3078899 3078916 3078907.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator marR Gene nd
atcggtcaatTCATTCATTTGACTTATActtgcctggg
1619049 1619066 1619057.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yqeJ Gene nd
atcgtgattgATTATAAAAAAAACTTATtatttatttt
2989311 2989328 2989319.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator rutB Gene nd
cctggcgtggCATAAGCGTTTTGCATATccaccacgat
1072776 1072793 1072784.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator pdeC Gene nd
atctatgcccGTGATAACCATTTTTTATgctcatcgct
4275769 4275786 4275777.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yhcC Transcription-Unit nd
taatcacataAATCACTTTTGCTTATCTtgtgtcagat
3354195 3354212 3354203.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator pgaA Gene nd
tgtaaacggtAATAACCTGTTTATCTTGcccggcccat
1092035 1092052 1092043.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator groS Gene nd
atggtagcacAATCAGATTCGCTTATGAcggcgatgaa
4370473 4370490 4370481.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yjgM Transcription-Unit nd
tgtctgtataTATAAGTTATATCAATGGattttttaat
4479689 4479706 4479697.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator lepA Gene nd
cgtatattctTCATAAAGTATGATTATTgtgccttaat
2707121 2707138 2707129.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yghG Transcription-Unit nd
cctgtacgtgTATCATTAATCGTTATGCtgtaattaat
3113132 3113149 3113140.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ycgX Transcription-Unit nd
gttcctcttaATAACAAAACCGTATCATcgtgagtaat
1212942 1212959 1212950.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator cydA Gene nd
atttatcaatGTATAAGTCTTGGAAATGggcatcaaaa
771125 771142 771133.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator sibA Gene nd
atttgttcgcTCATAAGAAATCCTTTCTtagagaatta
2153125 2153142 2153133.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ybiN Transcription-Unit nd
atttttacaaAATAAGACAAATCAATGAcatgcataat
842176 842193 842184.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator dcyD Gene nd
ttatgcagtgGCATAACAGCCTCCGATGtgtgttgttg
1999477 1999494 1999485.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator bisC Gene nd
gatgccggacCATAAGCCTCACGAATGCgtttatgttg
3716079 3716096 3716087.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator allR Gene nd
caaccgacttGCATAAGATAAACTAATTgttcattgtt
532950 532967 532958.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yaiS Transcription-Unit nd
atgcgaatatAATAGTTTTATTATATGTattgatattg
384977 384994 384985.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yfeK Gene nd
cacaaaacaaGGATAAGGTAATTCAATGaagaaaatca
2537327 2537344 2537335.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator pyrL Gene nd
gcattttattCCATTCATCCGACTTATAgggcggagtg
4472760 4472777 4472768.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yafD Gene nd
cacttgcttaCATAACAATATACAATTGctcgttgaaa
231015 231032 231023.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator cycA Gene nd
cataaaattaACATTAGATCTAAATCTTagtattcatc
4429725 4429742 4429733.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yneK Gene nd
catcagcaatTACATATCTCTTCCTGATgattttcccg
1615790 1615807 1615798.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator wzzE Gene nd
ccaaccatcgGTCATGGACGAAGCCTATaaagagtttg
3969316 3969333 3969324.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator sdhC Gene nd
ccacactgttACATAAGTTAATCTTAGGtgaaataccg
754734 754751 754742.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ynfG Gene nd
ccatgaccacACAATATGGATTTTTTATcgattccagc
1662998 1663015 1663006.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator gmk Gene nd
ccgcgccgtgTATAATAAGCTCGTATGTaggctttatt
3821374 3821391 3821382.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator nrfF Gene nd
ccgttaacggGTCAGACGCTGGTGTTATgggcgctgcc
4293461 4293478 4293469.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator nrfG Gene nd
ccgttaacggGTCAGACGCTGGTGTTATgggcgctgcc
4293461 4293478 4293469.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator nanK Gene nd
ttcaccagcgCCAGATCCGGCTCTTCTGgcgtttcagg
3370532 3370549 3370540.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yhaB Gene nd
cctgcgaggaAAATAAGCATCTATTATTgtttgtcatg
3267808 3267825 3267816.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yjcB Gene nd
gatttgtcatTAAAACAATAGGTTATATtgttttaagg
4274670 4274687 4274678.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator micC Gene nd
cgaagataatACATACAAAATAAAAATTatacttttaa
1437069 1437086 1437077.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator mdtE Gene nd
cgaattgcccGGTAGAACCGTTCCTTATgaagttgccg
3659391 3659408 3659399.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator gltF Gene nd
cgacacatccTATATTGAAAAAGCTTATgatactctcg
3361512 3361529 3361520.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yaiZ Gene nd
cgccattggcCTTATATTCATTCTTAATggcgtggtgg
399650 399667 399658.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yecD Gene nd
cgccgaggtaTCGATACAATAGTGTTATgtgggatctc
1951193 1951210 1951201.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yecE Gene nd
cgccgaggtaTCGATACAATAGTGTTATgtgggatctc
1951193 1951210 1951201.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ybgE Gene nd
cgctccaggcCCATAAATTTTTACGCTCccttaacttg
774642 774659 774650.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yigL Gene nd
cgctctacagAGGTTTAAATTTCTTATGtaccaggttg
4010185 4010202 4010193.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator gspO Gene nd
cggcacaggtAACATACGGTATTGTTATtgaagacctt
3465450 3465467 3465458.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator gspM Gene nd
cggcacaggtAACATACGGTATTGTTATtgaagacctt
3465450 3465467 3465458.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ygjH Transcription-Unit nd
acgacgtcgcCATCCGATCTTTTTATACgacgcgtacg
3220903 3220920 3220911.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator insK Gene nd
cgttaaaaagCGTATTAGTGAGATTTATcacgagaata
3721333 3721350 3721341.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yagU Transcription-Unit nd
ctaatataaaAATAGGGAGAAATGATGGagcttatatt
302848 302865 302856.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator rflP Gene nd
agggatgaggCCATAAGACATAACAATTacagaaggag
1792075 1792092 1792083.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator rfaH Transcription-Unit nd
ctctttattaATAAGATTAAGCAATAGCatggagcgag
4024385 4024402 4024393.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator bfr Gene nd
tgccgaccggAATAAATTTTTTTAATTGctggaacgag
3466893 3466910 3466901.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ynfB Gene nd
ctcttattgaCATCATGTATAGTTATAGggcgacataa
1655690 1655707 1655698.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yqeK Transcription-Unit nd
atgatttgtcAATAAAGATAGCGGATATttctgaagag
2990733 2990750 2990741.0 nd [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ], [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ybeT Transcription-Unit nd
catcctggggAATAAATAATCGTGATGAtttaattcag
679645 679662 679653.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator hcaE Gene nd
ctgagacgaaACATCGGTAATACTTTTGgcagtaaatt
2668563 2668580 2668571.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yfdV Transcription-Unit nd
atgccgccatTATTAAAAATAACGATCGtcaccggcag
2490531 2490548 2490539.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator rfbC Gene nd
aagatactgcCCATAATTATTCTTTATTagtggtacag
2110175 2110192 2110183.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator wecH Transcription-Unit nd
cttaagcctcTATAAGCTGTAGTGATAAaactcagatt
3725795 3725812 3725803.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ydiL Transcription-Unit nd
cttcatgccaTCATAGAGAAAATAAATAaccgcatcgg
1770808 1770825 1770816.0 nd [EXP-IEP-RNA-SEQ], [COMP-HINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ybdK Transcription-Unit nd
cgggtaatggCATAGGTTTCTCTTATGTtggcgttttc
607381 607398 607389.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [COMP-HINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator pfkB Gene nd
gaaatcagccTATAGGAGGAAATGATGGtacgtatcta
1806356 1806373 1806364.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [COMP-AINF-SIMILAR-TO-CONSENSUS], [EXP-CHIP-SEQ] S [2]
  Nac activator bglX Gene nd
tcctactgaaCATAGCCATTTCATATGGatttttcttc
2221976 2221993 2221984.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator osmB Gene nd
agtaagctctCTATAACTATAATAGCTAagaataagtc
1343370 1343387 1343378.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator pitB Gene nd
atattggaatATATAAATATTGAATATTttgattaatc
3136586 3136603 3136594.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ybeR Gene nd
gcagataaaaCATATTATATTTTTATGTgttccatttt
676576 676593 676584.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator glcA Gene nd
gccaggcgtgTAATAACGGTTCGGTATAgccgtttggc
3121670 3121687 3121678.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ycaN Transcription-Unit nd
gctaaaaggaTATATTGACAGAGTATGGaataatgggc
949968 949985 949976.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator argO Gene nd
tattaattggCAATCAGAAAAACTAATAagagagaggc
3068890 3068907 3068898.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ycaK Gene nd
gctaaaaggaTATATTGACAGAGTATGGaataatgggc
949968 949985 949976.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ibpA Gene nd
acagatgaatTTATTATGATAAGAAATGtgttgttagc
3867723 3867740 3867731.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator msrA Gene nd
aaaatgtgcgCTATATCCGACAGTTATGctgtgtaagc
4442387 4442404 4442395.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yeiH Transcription-Unit nd
gcttaccactTATAAAGATTAATTATAAatatataatc
2249633 2249650 2249641.0 nd [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ], [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator tomB Gene nd
aattaactaaCAATCAGTATTTTTTATGaattttatcc
481110 481127 481118.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ldtF Transcription-Unit nd
taagaagcgtCATAAGATATTTCAATTTattcatatcc
246141 246158 246149.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ybbW Gene nd
ggatttatggAACATCAGAGAAAACTATtccagcaacg
537637 537654 537645.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ydcI Gene nd
gaaactgaccTATAACCGAAGGTAATATccccagtgcc
1494712 1494729 1494720.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator mgtS Gene nd
ggccgtactgGGAATAATTTTATTTTCTggttttctgg
1622682 1622699 1622690.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ydcS Gene nd
ggcggtaaaaCAATTAGGCAAACTTATTcaagaacggc
1511377 1511394 1511385.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator livH Gene nd
aatagaggcaGAGAAGTTTTCGCTATGCcccaccaccc
3595955 3595972 3595963.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator cmtA Gene nd
tccagtgcctTATCGACATATTTTATGAccaacccacc
3078511 3078528 3078519.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ydeE Transcription-Unit nd
ggttttattgCCATTACTTTAGTGAATAacgtgacgct
1621597 1621614 1621605.0 nd [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ], [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator oppA Gene nd
gtacgaatcgACATAAGGTGATCGTCTGaatcaccaga
1301015 1301032 1301023.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator cheA Gene nd
aaaaatgtctGATAAAAATCGCTTATATccatgctcac
1975297 1975314 1975305.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator uspC Transcription-Unit nd
gtgattgattAATTATCTTTACTAATAAtcagactaat
1979632 1979649 1979640.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator leuL Gene nd
aatgcattaaATATATAAATTAATTATTaaataagcac
84069 84086 84077.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ileY Gene nd
aatgaaggggTATAATAAATGATAATACtctggcttta
2785487 2785504 2785495.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yegH Gene nd
taacttccgaATATAAGGTGACATTATGgtaattgaat
2137537 2137554 2137545.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yigI Gene nd
ctttaggaagGGATAACTAACGGCTATGgagttaagta
4004772 4004789 4004780.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yfbL Transcription-Unit nd
tatcgaaaccCATAGCAAATAATGATTCaacaacgcaa
2385814 2385831 2385822.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ytfJ Gene nd
agcgcacaaaTCATATGAAAAATGAATGcttatactga
4439381 4439398 4439389.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ybhM Transcription-Unit nd
tccataaatgCAAAAGTATTTTGTATGCgtggttttaa
820717 820734 820725.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator lysA Gene nd
tatgtcgagtCTATGCAAAAATGATATGgattaccgga
2978977 2978994 2978985.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator kbaY Gene nd
tccgtggcagGCATAAGAGGATCGCATTatgagcatta
3283125 3283142 3283133.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yobA Gene nd
tttttacagaGCATAACCTTGTCTAATGtctgagtcga
1925006 1925023 1925014.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yfiL Gene nd
tcgggcagcgCCATAAAAGATGACGATGcatttagcga
2741496 2741513 2741504.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ftnB Gene nd
tgaaatgtaaAAATATATAAACTTGATGatttaagcat
1986735 1986752 1986743.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ackA Transcription-Unit nd
tgagtcgtcaAATTCATATACATTATGCcattggctga
2413286 2413303 2413294.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator elfA Transcription-Unit nd
tgatgacacgCATACTCTCTCCTTATAAccaattgttc
997510 997527 997518.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator iaaA Gene nd
tgcggaggcaAAATCGAATTTGCCTATTatgtcagaaa
866386 866403 866394.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator rluE Gene nd
tttttgcatgGTATTTTCAGAGATTATGaattgccgca
1194923 1194940 1194931.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator rlmM Transcription-Unit nd
catcaggttgATAACATTCATAAATGACataacccgca
2941103 2941120 2941111.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ycaK Transcription-Unit nd
tgctaaaaggATATATTGACAGAGTATGgaataatggg
949967 949984 949975.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yafV Gene nd
gcctgggtgaTGAAAGGCGGTACTTATActcccgcaca
240524 240541 240532.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yrhB Transcription-Unit nd
ttacccgaatCATAAGATTCTGATATCTtaaataagaa
3584539 3584556 3584547.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yhjE Transcription-Unit nd
ttagccaaaaAATAAGAAAAGATTATGCaagcaacagc
3674772 3674789 3674780.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yihD Gene nd
ttatcgtcgtCATCAGATTCACCGATATcgcctctttt
4041988 4042005 4041996.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ydiL Gene nd
ttcatgccatCATAGAGAAAATAAATAAccgcatcggc
1770809 1770826 1770817.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yjcF Transcription-Unit nd
cattatagcgCATAAAATATCCTTATAAttaacaagaa
4283073 4283090 4283081.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator wcaE Gene nd
acgggtggaaATATAAGGAAACGCGATTaccacaccaa
2130088 2130105 2130096.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ybhD Transcription-Unit nd
gatacagctcATTAAATTTACCGATTGCcagcggtaaa
800228 800245 800236.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator rpmH Gene nd
tttacgccgcATATTGGAAAATTTAATGaccatagaca
3884011 3884028 3884019.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator ppdC Gene nd
aaccggcaatCAATAAGGCTTCATTATCtgccagtaaa
2962878 2962895 2962886.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator moeA Gene nd
tgcggaggcaAAATCGAATTTGCCTATTatgtcagaaa
866386 866403 866394.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yobF Gene nd
tgtaaatttaAAATAAGAAAAATTGATGaatgagcaaa
1907985 1908002 1907993.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator dsbG Gene nd
acacggaggaAGTATAGATGTCCTTGATtaacaccaaa
638938 638955 638946.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator icd Gene nd
tttttgcatgGTATTTTCAGAGATTATGaattgccgca
1194923 1194940 1194931.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac activator yhbX Transcription-Unit nd
ggcaaggaaaCATCATATTTTATTATTActgccaaaaa
3321211 3321228 3321219.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor yhcD Gene nd
aaaacgggggCTATAAATAAGACCTATTttctaccaca
3362650 3362667 3362658.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor mobA Gene nd
ttatcgtcgtCATCAGATTCACCGATATcgcctctttt
4041988 4042005 4041996.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor tnaB Gene nd
aaaagcactcTGCATTTTGGGGTGTTATggttatagca
3890265 3890282 3890273.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor gltP Transcription-Unit nd
aaaatctttcCATAACAAATGGTTATTCattaatcctg
4294254 4294271 4294262.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor thrS Gene nd
cgttggctgcCATCAGGAAGAGTTATAAcaggcatttt
1802546 1802563 1802554.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor hemB Gene nd
tgttgcatatTCATAGGATATTTATCTGgtttgtgttt
389977 389994 389985.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor tdcR Transcription-Unit nd
aaatgacgggGATAACCATATTTTATGGcgataacatc
3267262 3267279 3267270.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor mscL Gene nd
aaatggcttaACATTTGTTAGACTTATGgttgtcggct
3437980 3437997 3437988.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor pabC Gene nd
aacaattctcTGATAAGGAGCCGGTATGttcttaatta
1153285 1153302 1153293.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor amn Gene nd
aacgttgagcGCATTTCCTTTCTTTATGgcgcttgaag
2054630 2054647 2054638.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor mtfA Transcription-Unit nd
aactggttggATATACAAGATTCTTTTGatgcttctgg
2044048 2044065 2044056.0 nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor asnT Gene nd
aactggttggATATACAAGATTCTTTTGatgcttctgg
2044048 2044065 2044056.0 nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor ugd Transcription-Unit nd
agattttcttTATAAGAATAGCTGATATttattaagtt
2099737 2099754 2099745.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor yegR Gene nd
tttttttatgCATAAGCCCTATCTCTGGtaaccgtctt
2167834 2167851 2167842.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor dcm Gene nd
tggtttgggtAATAACGTTTGCAGATGGgcgaactctt
2032094 2032111 2032102.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor yciZ Gene nd
agcgctaagtATATATATTCATCTACTTatgcgcgctt
1344741 1344758 1344749.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor ykgE Gene nd
aagtagctctGAATAGGTATAAGGGATGtagccatttt
321339 321356 321347.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor ligB Transcription-Unit nd
ccgcgccgtgTATAATAAGCTCGTATGTaggctttatt
3821374 3821391 3821382.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor abgA Gene nd
ttcacgtagcGATAGTTTTTACTTATCActaactgatt
1404611 1404628 1404619.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor znuA Gene nd
gactttgcggCATAAGTTCCACTAATTTtccatggatt
1942086 1942103 1942094.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor fhuF Gene nd
ctaatcatagCGATAGGTTTACCCGATAgcaagggatt
4605706 4605723 4605714.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor leuO Gene nd
aatgcattaaATATATAAATTAATTATTaaataagcac
84069 84086 84077.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor ygfI Transcription-Unit nd
taattgtcggATAAGTATTATCTATGCCaatcacaatt
3066865 3066882 3066873.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY], [EXP-CHIP-SEQ] S [2]
  Nac repressor hfq Gene nd
acaaataagcATATAAGGAAAAGAGAGAatggctaagg
4400270 4400287 4400278.0 nd [EXP-IEP-RNA-SEQ], [COMP-AINF-PATTERN-DISCOVERY]