RegulonDB RegulonDB 10.6.3: Regulon Form
   
   


SdiA regulon in Escherichia coli K-12 genome


TRANSCRIPTION FACTOR: Info
Name:
SdiA      Tractordb tool
Connectivity class Local Regulator
Sensing Class External sensing using transported metabolites
Synonym(s): DNA-binding transcriptional dual regulator SdiA
Gene name(s): sdiA
Functional conformation(s): SdiA
Coregulator(s): ArcA, CRP, GadW, GadX, H-NS, McbR, PhoP, RcdA, SdiA, SlyA, ppGpp
Summary: TF Summary ...[more]

REGULATION EXERTED BY SdiA Info M3D | Colombos
KNOWN BINDING SITES (The central relative position is relative to the promoter +1)    
SdiA activator    
Transcription Factor
Regulated
Binding Sites
Evidence
References
Functional conformation
Function
Promoter
Gene(s)
LeftPos
RigthPos
Central Rel-Pos
Sequence
SdiA activator ftsQp2 ftsQ 102697 102714 -36.5 tgggaatgtcAAAAGTAGTAGCAGAAAAtgctctacaa [BPP]
[GEA]
[1]
SdiA activator ydiVp ydiV 1792132 1792149 -53.0 gataatctaaAAAAAGGACCCCTGAAAAagtggttaac [AIBSCS]
[BPP]
[GEA]
[2]

Evidence: [BPP] Binding of purified proteins
[GEA] Gene expression analysis
[AIBSCS] Automated inference based on similarity to consensus sequences
Reference(s): [1] Yamamoto K., et al., 2001
[2] Zhou X., et al., 2008



Reference(s)    

 [1] Yamamoto K., Yata K., Fujita N., Ishihama A., 2001, Novel mode of transcription regulation by SdiA, an Escherichia coli homologue of the quorum-sensing regulator., Mol Microbiol 41(5):1187-98

 [2] Zhou X., Meng X., Sun B., 2008, An EAL domain protein and cyclic AMP contribute to the interaction between the two quorum sensing systems in Escherichia coli., Cell Res 18(9):937-48


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