RegulonDB RegulonDB 10.8: Regulon Form
   
   


GadE-RcsB,Rob regulon in Escherichia coli K-12 genome


TRANSCRIPTION FACTOR: Info
Name:
Rob Weight Matrix      Tractordb tool
Connectivity class Local Regulator
Synonym(s): CbpB, DNA-binding transcriptional dual regulator Rob, RobA, right origin-binding protein
Gene name(s): rob
Functional conformation(s): Rob
Coregulator(s): AcrR, ArcA, CRP, CpxR, Cra, DnaA, EnvR, FNR, Fis, Fur, GadE-RcsB, H-NS, HU, IHF, Lrp, MarA, MarR, MprA, OmpR, OxyR, PhoP, Rob, SoxR, SoxS
Summary: TF Summary ...[more]
TRANSCRIPTION FACTOR: Info
Name:
GadE-RcsB      Tractordb tool
Connectivity class Local Regulator
Synonym(s): GadE-RcsB DNA-binding transcriptional activator
Gene name(s): gadE, rcsB
Functional conformation(s): GadE-RcsB
Coregulator(s): AdiY, ArcA, CRP, CadC, FNR, Fis, GadE, GadE-RcsB, GadW, GadX, H-NS, Lrp, MarA, OmpR, PhoB, RcsB, Rob, TorR, YdeO, ppGpp
Summary: TF Summary ...[more]

REGULATION EXERTED BY GadE-RcsB,Rob Info M3D | Colombos
KNOWN BINDING SITES (The central relative position is relative to the promoter +1)    
GadE-RcsB activator Rob activator    
Transcription Factor
Regulated
Binding Sites
Evidence
References
Functional conformation
Function
Promoter
Gene(s)
LeftPos
RigthPos
Central Rel-Pos
Sequence
Rob activator aslBp aslB         [GEA] [1]
GadE-RcsB activator aslBp aslB         [BPP] [2]

Evidence: [GEA] Gene expression analysis
[BPP] Binding of purified proteins
Reference(s): [1] Bennik MH., et al., 2000
[2] Krin E., et al., 2010



Reference(s)    

 [1] Bennik MH., Pomposiello PJ., Thorne DF., Demple B., 2000, Defining a rob regulon in Escherichia coli by using transposon mutagenesis., J Bacteriol 182(13):3794-801

 [2] Krin E., Danchin A., Soutourina O., 2010, Decrypting the H-NS-dependent regulatory cascade of acid stress resistance in Escherichia coli., BMC Microbiol 10:273


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