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RcsB-BglJ regulon in Escherichia coli K-12 genome


TRANSCRIPTION FACTOR: Info
Name:
RcsB-BglJ      Tractordb tool
Connectivity class Local Regulator
Synonym(s): RcsB-BglJ DNA-binding transcriptional activator, RcsBgl
Gene name(s): bglJ, rcsB
Functional conformation(s): RcsB-BglJ
Coregulator(s): CRP, Fis, H-NS, LeuO, LexA, RcsB-BglJ, StpA
Summary: TF Summary ...[more]

REGULATION EXERTED BY RcsB-BglJ Info M3D | Colombos
KNOWN BINDING SITES (The central relative position is relative to the promoter +1)    
RcsB-BglJ activator    
Transcription Factor
Regulated
Binding Sites
Evidence
References
Functional conformation
Function
Promoter
Gene(s)
LeftPos
RigthPos
Central Rel-Pos
Sequence
RcsB-BglJ activator sfsBp sfsB 3334781 3334801 -67.5 ggatgtgcatCTTTATATATTCTGAATATTCacactcttta   [1]
RcsB-BglJ activator yecTp yecT 1961857 1961877 -68.5 ttattgccatCTAAATGTATTCTGAAAATGGacatgccatt   [1]
RcsB-BglJ activator yqhGp yqhG 3157491 3157511 -44.5 ccgctaccggACTTTTCAGAAATCATTTATTcccctcgcgt   [1]
RcsB-BglJ activator ygiZp ygiZ 3172379 3172399 -65.5 accgatgcagGATAAATATTTTCTGAAAATGacaatactga   [1]
RcsB-BglJ activator yidLp yidL 3860192 3860212 -51.5 gtcaggcagtCAGATTCTTAAAATACAAACGtcgtatccct   [1]
RcsB-BglJ activator ykiAp ykiA 408486 408506 -78.5 cttgaacgggAGGGCATTTTTCTGAAATATCctttctttag   [1]
RcsB-BglJ activator ynbAp ynbA , ynbB , ynbC , ynbD 1477522 1477542 -65.5 tccccaatacCTTGATATATTCTGAATTTTTaatgaaacgg   [1]
RcsB-BglJ activator ynjIp ynjI 1844956 1844976 -65.5 ttcgtgctatTCGAGTCATATTCTGAAATATccagcggatc   [1]

Reference(s): [1] Salscheider SL., et al., 2014



Reference(s)    

 [1] Salscheider SL., Jahn A., Schnetz K., 2014, Transcriptional regulation by BglJ-RcsB, a pleiotropic heteromeric activator in Escherichia coli., Nucleic Acids Res 42(5):2999-3008


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