RegulonDB RegulonDB 10.10: Regulon Form
   
   


FadR,IclR regulon in Escherichia coli K-12 genome


TRANSCRIPTION FACTOR: Info
Name:
FadR Weight Matrix      Tractordb tool
Connectivity class Local Regulator
Sensing Class Using internal synthesized signals
Synonym(s): DNA-binding transcriptional dual regulator FadR, Dec, Ole, OleR, ThdB
Gene name(s): fadR
Functional conformation(s): FadR-an acyl-CoA , FadR
Coregulator(s): ArcA, CRP, DksA-ppGpp, FabR, FadR, Fis, HipB, IHF, IclR, OmpR, PhoP, Rob, ppGpp
Summary: TF Summary ...[more]
TRANSCRIPTION FACTOR: Info
Name:
IclR Weight Matrix      Tractordb tool
Connectivity class Local Regulator
Sensing Class Using internal synthesized signals
Synonym(s): DNA-binding transcriptional repressor IclR
Gene name(s): iclR
Functional conformation(s): IclR-glyoxylate , IclR , IclR-pyruvate
Coregulator(s): ArcA, CRP, Cra, FadR, IHF, IclR
Summary: TF Summary ...[more]

REGULATION EXERTED BY FadR,IclR Info M3D | Colombos
KNOWN BINDING SITES (The central relative position is relative to the promoter +1)    
FadR activator IclR repressor    
Transcription Factor
Regulated
Binding Sites
Evidence
References
Functional conformation
Function
Promoter
Gene(s)
LeftPos
RigthPos
Central Rel-Pos
Sequence
FadR activator iclRp iclR 4223698 4223714 -54.0 gttcaacattAACTCATCGGATCAGTTcagtaactat [GEA] [1]
IclR-pyruvate repressor iclRp iclR 4223652 4223667 -7.0 aacaataaaaATGAAAATGATTTCCAcgatacagaa [GEA] [2]

Evidence: [GEA] Gene expression analysis
Reference(s): [1] Gui L., et al., 1996
[2] Yamamoto K., et al., 2003



Reference(s)    

 [1] Gui L., Sunnarborg A., LaPorte DC., 1996, Regulated expression of a repressor protein: FadR activates iclR., J Bacteriol 178(15):4704-9

 [2] Yamamoto K., Ishihama A., 2003, Two different modes of transcription repression of the Escherichia coli acetate operon by IclR., Mol Microbiol 47(1):183-94


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