RegulonDB

TRANSCRIPTION FACTOR:

Name:

CRP	Weight Matrix Tractordb tool

Connectivity class

Global Regulator

Sensing Class

Using internal synthesized signals

Synonym(s):

Cap, Csm, DNA-binding transcriptional dual regulator CRP, GurB

Gene name(s):

crp

Functional conformation(s):

CRP-cyclic-AMP , CRP

Coregulator(s):

AcrR, AdiY, AgaR, AraC, ArcA, ArgP, ArgR, AscG, BasR, BolA, BtsR, CRP, CRP-Sxy, CaiF, ChbR, ComR, CpxR, Cra, CreB, CsgD, CspA, CsqR, CusR, CytR, DcuR, DeoR, DgoR, DksA-ppGpp, DnaA, DpiA, DsdC, EbgR, EnvY, EvgA, ExuR, FNR, FadR, FeaR, FhlA, Fis, FlhDC, FliZ, FrlR, FucR, Fur, GadE, GadE-RcsB, GadW, GadX, GalR, GalS, GatR, GcvA, GlaR, GlcC, GlpR, GlrR, GntR, GutM, H-NS, HU, HdfR, HipB, HprR, HyfR, HypT, IHF, IclR, IdnR, LacI, LeuO, LexA, LrhA, Lrp, LsrR, MalI, MalT, MarA, MarR, MatA, McbR, MelR, MetJ, MhpR, Mlc, MlrA, ModE, MprA, MqsA, MurR, Nac, NadR, NagC, NanR, NarL, NarP, NrdR, NsrR, NtrC, OmpR, OxyR, PaaX, PdhR, PhoB, PhoP, PlaR, PrpR, PurR, PuuR, QseB, RbsR, RcdA, RcsAB, RcsB, RcsB-BglJ, RhaR, RhaS, Rob, RstA, SdiA, SlyA, SoxR, SoxS, SrlR, StpA, TdcA, TdcR, TorR, TreR, UhpA, UidR, UlaR, UvrY, UxuR, XylR, YdeO, YjjQ, ZraR, ppGpp

Summary:

TF Summary ...[more]

TRANSCRIPTION FACTOR:

Info

Name:

GlpR	Weight Matrix Tractordb tool

Connectivity class

Local Regulator

Sensing Class

Sensing external and internal signals

Gene name(s):

glpR

Functional conformation(s):

GlpR , GlpR-sn-glycerol 3-phosphate , GlpR-glycerol

Coregulator(s):

ArcA, CRP, FNR, Fis, FlhDC, GlpR, IHF

Summary:

TF Summary ...[more]

REGULATION EXERTED BY CRP,GlpR

Info M3D | Colombos

KNOWN BINDING SITES (The central relative position is relative to the promoter +1)
CRP activator GlpR repressor
Transcription Factor		Regulated		Binding Sites				Evidence	References
Functional conformation	Function	Promoter	Gene(s)	LeftPos	RigthPos	Central Rel-Pos	Sequence
CRP-cyclic-AMP	activator	glpFp	glpX , glpK , glpF	4118211	4118232	-60.5	ataacgctcaTTTTATGACGAGGCACACACATtttaagttcg	[GEA]	[1]
CRP-cyclic-AMP	activator	glpFp	glpX , glpK , glpF	4118188	4118209	-37.5	cacacacattTTAAGTTCGATATTTCTCGTTTttgctcgtta	[GEA]	[1]
GlpR	repressor	glpFp	glpX , glpK , glpF	4118169	4118188	-17.5	atttctcgttTTTGCTCGTTAACGATAAGTttacagcatg		[1]
GlpR	repressor	glpFp	glpX , glpK , glpF	4118189	4118208	-37.5	acacacatttTAAGTTCGATATTTCTCGTTtttgctcgtt		[1]
GlpR	repressor	glpFp	glpX , glpK , glpF	4118210	4118229	-58.5	acgctcatttTATGACGAGGCACACACATTttaagttcga		[1]
GlpR	repressor	glpFp	glpX , glpK , glpF	4118231	4118250	-79.5	gatggaataaATGGCGCGATAACGCTCATTttatgacgag		[1]
GlpR	repressor	glpFp	glpX , glpK , glpF	4117151	4117170	1001.5	accagctcccGCGCGGTCGTAATGGATCACgatgccaata		[1]
GlpR	repressor	glpFp	glpX , glpK , glpF	4117109	4117128	1043.5	attagcgtgtCGCAGCGCGAATTTGAGCAAatctacccaa		[1]

Evidence:	[GEA] Gene expression analysis
Reference(s):	[1] Weissenborn DL., et al., 1992