RegulonDB

TRANSCRIPTION FACTOR:

Name:

NagC	Weight Matrix Tractordb tool

Connectivity class

Local Regulator

Sensing Class

External sensing using transported metabolites

Synonym(s):

DNA-binding transcriptional dual regulator NagC, NagR, transcriptional repressor of nag (N-acetylglucosamine) operon

Gene name(s):

nagC

Functional conformation(s):

NagC , NagC-N-acetyl-D-glucosamine 6-phosphate

Coregulator(s):

AraC, BasR, CRP, ChbR, Cra, DksA, DksA-ppGpp, EvgA, FNR, Fur, GadX, GalR, GalS, H-NS, IHF, LexA, Mlc, NagC, NanR, NarL, NarP, OmpR, PhoP, RcsB, UvrY, ppGpp

Summary:

TF Summary ...[more]

TRANSCRIPTION FACTOR:

Info

Name:

LexA	Weight Matrix Tractordb tool

Connectivity class

Local Regulator

Sensing Class

Using internal synthesized signals

Synonym(s):

DNA-binding transcriptional repressor LexA, ExrA, Spr, Tsl, UmuA

Gene name(s):

lexA

Functional conformation(s):

LexA

Coregulator(s):

ArcA, CRP, DinJ-YafQ, DnaA, LexA, NagC, RcdA, RcsB-BglJ, ppGpp

Summary:

TF Summary ...[more]

REGULATION EXERTED BY LexA,NagC

Info M3D | Colombos

KNOWN BINDING SITES (The central relative position is relative to the promoter +1)
LexA repressor NagC repressor
Transcription Factor		Regulated		Binding Sites				Evidence	References
Functional conformation	Function	Promoter	Gene(s)	LeftPos	RigthPos	Central Rel-Pos	Sequence
NagC	repressor	dinIp	dinI	1121512	1121534	-14.0	ttgtcattagGTTATTTTACCTGTATAAATAACcagtatattc
LexA	repressor	dinIp	dinI	1121507	1121526	-7.5	aggttattttACCTGTATAAATAACCAGTAtattcaacag	[GEA]	[1] [2]

Evidence:	[GEA] Gene expression analysis
Reference(s):	[1] Lewis LK., et al., 1994 [2] Yasuda T., et al., 1996

Reference(s)
[1] Lewis LK., Harlow GR., Gregg-Jolly LA., Mount DW., 1994, Identification of high affinity binding sites for LexA which define new DNA damage-inducible genes in Escherichia coli., J Mol Biol 241(4):507-23
[2] Yasuda T., Nagata T., Ohmori H., 1996, Multicopy suppressors of the cold-sensitive phenotype of the pcsA68 (dinD68) mutation in Escherichia coli., J Bacteriol 178(13):3854-9