| TRANSCRIPTION FACTOR: |
Info |
| Name: |
|
| Connectivity class |
Global Regulator |
| Sensing Class |
Using internal synthesized signals |
| Synonym(s): |
Cap, Csm, DNA-binding transcriptional dual regulator CRP, GurB |
| Gene name(s): |
crp
|
|
| Functional conformation(s): |
CRP
, CRP-cyclic-AMP
|
| Coregulator(s): |
AaeR,
AcrR,
AdiY,
AgaR,
AraC,
ArcA,
ArgP,
ArgR,
AscG,
BasR,
BolA,
BtsR,
CRP,
CRP-Sxy,
CaiF,
ChbR,
ComR,
CpxR,
Cra,
CreB,
CsgD,
CspA,
CsqR,
CusR,
CytR,
DcuR,
DeoR,
DgoR,
DksA-ppGpp,
DnaA,
DpiA,
DsdC,
EbgR,
EnvY,
EvgA,
ExuR,
FNR,
FadR,
FeaR,
FhlA,
Fis,
FlhDC,
FliZ,
FrlR,
FucR,
Fur,
GadE,
GadE-RcsB,
GadW,
GadX,
GalR,
GalS,
GatR,
GcvA,
GlaR,
GlcC,
GlpR,
GlrR,
GntR,
GutM,
H-NS,
HU,
HdfR,
HipB,
HprR,
HyfR,
HypT,
IHF,
IclR,
IdnR,
LacI,
LeuO,
LexA,
LrhA,
Lrp,
LsrR,
MalI,
MalT,
MarA,
MarR,
MatA,
McbR,
MelR,
MetJ,
MhpR,
Mlc,
MlrA,
ModE,
MprA,
MqsA,
MurR,
Nac,
NadR,
NagC,
NanR,
NarL,
NarP,
NrdR,
NsrR,
NtrC,
OmpR,
OxyR,
PaaX,
PdhR,
PhoB,
PhoP,
PlaR,
PrpR,
PurR,
PuuR,
QseB,
RbsR,
RcdA,
RcsAB,
RcsB,
RcsB-BglJ,
RhaR,
RhaS,
Rob,
RspR,
RstA,
SdiA,
SlyA,
SoxR,
SoxS,
SrlR,
StpA,
TdcA,
TdcR,
TorR,
TreR,
UhpA,
UidR,
UlaR,
UvrY,
UxuR,
XylR,
YdeO,
YjjQ,
ZraR,
ppGpp
|
| Summary: |
TF Summary ...[more] |
| TRANSCRIPTION FACTOR: |
Info |
| Name: |
|
| Connectivity class |
Local Regulator |
| Synonym(s): |
DNA-binding transcriptional repressor ComR, YcfQ |
| Gene name(s): |
comR
|
|
| Functional conformation(s): |
ComR-Cu+
, ComR
|
| Coregulator(s): |
CRP,
ComR
|
| Summary: |
TF Summary ...[more] |
| KNOWN BINDING SITES (The central relative position is relative to the promoter +1) |
|
|
| CRP repressor ComR repressor |
|
|
Transcription Factor |
Regulated
| Binding Sites |
Evidence |
References |
| Functional conformation |
Function |
Promoter |
Gene(s) |
LeftPos |
RigthPos |
Central Rel-Pos |
Sequence |
|
|
| CRP-cyclic-AMP |
repressor |
bhsAp |
bhsA
|
1168986 |
1169008
|
-36.5
|
aaaatatcttGTATGTGATCCAGATCACATCTAtcatttagtt |
[COMP-HINF-SIMILAR-TO-CONSENSUS]
[EXP-IEP-GENE-EXPRESSION-ANALYSIS]
|
[1]
|
| ComR |
repressor |
bhsAp |
bhsA
|
|
| Evidence: |
[COMP-HINF-SIMILAR-TO-CONSENSUS] A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.
[EXP-IEP-GENE-EXPRESSION-ANALYSIS] Gene expression analysis
|
| Reference(s): |
[1] Raghavan R., et al., 2011
|
|
[1] Raghavan R., Sage A., Ochman H., 2011, Genome-wide identification of transcription start sites yields a novel thermosensing RNA and new cyclic AMP receptor protein-regulated genes in Escherichia coli., J Bacteriol 193(11):2871-4