RegulonDB RegulonDB 10.10:Coexpression
   


Gene Coexpression in Escherichia coli K-12 genome


 

This section aims to give an overview of different features that are known about the query genes, such as their transcriptional regulation, their gene product, the operon to which they belong and the description of gene ontologies they are associated to. In the case one or more of the input genes are not found in our database, they will appear under the section "gene (s) not found". The table can be sorted by any of the features by clicking icon attached to the name of the feature´s associated column.

Query size: 41 gene(s)


  Gene name Product Operon Gene regulation GOs list
  aceE subunit of E1p component of pyruvate dehydrogenase complex pdhR-aceEF-lpd ArcA , CRP , Cra , FNR , NsrR , PdhR view
  aceF pyruvate dehydrogenase, E2 subunit pdhR-aceEF-lpd ArcA , CRP , Cra , FNR , NsrR , PdhR view
  cyoA cytochrome bo terminal oxidase subunit II cyoABCDE ArcA , CRP , Cra , CusR , FNR , Fis , Fur , GadE , PdhR , YedW view
  cyoB cytochrome bo terminal oxidase subunit I cyoABCDE ArcA , CRP , Cra , CusR , FNR , Fis , Fur , GadE , PdhR , YedW view
  cyoC cytochrome bo terminal oxidase subunit III cyoABCDE ArcA , CRP , Cra , CusR , FNR , Fis , Fur , GadE , PdhR , YedW view
  cyoD cytochrome bo terminal oxidase subunit IV cyoABCDE ArcA , CRP , Cra , CusR , FNR , Fis , Fur , GadE , PdhR , YedW view
  cyoE heme O synthase cyoABCDE ArcA , CRP , Cra , CusR , FNR , Fis , Fur , GadE , PdhR , YedW view
  ddlB D-alanine-D-alanine ligase B mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC LexA , MraZ , PdhR view
  fecA ferric citrate outer membrane porin FecA fecABCDE CRP , Fur , HypT , PdhR view
  fecB ferric citrate ABC transporter - periplasmic binding protein fecABCDE CRP , Fur , HypT , PdhR view
  fecC ferric citrate ABC transporter - membrane subunit fecABCDE CRP , Fur , HypT , PdhR view
  fecD ferric citrate ABC transporter - membrane subunit fecABCDE CRP , Fur , HypT , PdhR view
  fecE ferric citrate ABC transporter - ATP binding subunit fecABCDE CRP , Fur , HypT , PdhR view
  ftsA essential cell division protein FtsA mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC LexA , MraZ , PdhR , RcsB , SdiA view
  ftsI essential cell division protein FtsI; penicillin-binding protein 3 mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC LexA , MraZ , PdhR view
  ftsL essential cell division protein FtsL mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC LexA , MraZ , PdhR view
  ftsQ essential cell division protein FtsQ mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC LexA , MraZ , PdhR , SdiA view
  ftsW essential cell division protein FtsW; lipid II flippase mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC LexA , MraZ , PdhR view
  ftsZ essential cell division protein FtsZ mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC LexA , MraZ , PdhR , RcsB , SdiA view
  glcA glycolate / lactate:H+ symporter glcDEFGBA ArcA , GlcC , IHF , PdhR view
  glcB malate synthase G glcDEFGBA ArcA , GlcC , IHF , PdhR view
  glcD glycolate oxidase, predicted FAD-linked subunit glcDEFGBA ArcA , GlcC , IHF , PdhR view
  glcE glycolate oxidase, predicted FAD-binding subunit glcDEFGBA ArcA , GlcC , IHF , PdhR view
  glcF glycolate oxidase, predicted iron-sulfur subunit glcDEFGBA ArcA , GlcC , IHF , PdhR view
  glcG conserved protein glcDEFGBA ArcA , GlcC , IHF , PdhR nd
  grcA stress-induced alternate pyruvate formate-lyase subunit grcA ArcA , CRP , FNR , Fis , Fur , PdhR view
  hemL glutamate-1-semialdehyde aminotransferase hemL PdhR , PhoP view
  hha haemolysin expression modulating protein tomB-hha BasR , CpxR , PdhR view
  lpd lipoamide dehydrogenase pdhR-aceEF-lpd ArcA , CRP , Cra , FNR , Fis , Fur , PdhR view
  lpxC UDP-3-O-acyl-N-acetylglucosamine deacetylase mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC LexA , MraZ , PdhR view
  mraY phospho-N-acetylmuramoyl-pentapeptide transferase mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC LexA , MraZ , PdhR view
  mraZ MraZ DNA-binding transcriptional repressor mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC MraZ , PdhR view
  murC UDP-N-acetylmuramate-alanine ligase mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC LexA , MraZ , PdhR view
  murD UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC LexA , MraZ , PdhR view
  murE UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC LexA , MraZ , PdhR view
  murF D-alanyl-D-alanine-adding enzyme mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC LexA , MraZ , PdhR view
  murG N-acetylglucosaminyl transferase mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC LexA , MraZ , PdhR view
  ndh NADH:quinone oxidoreductase II ndh ArcA , FNR , Fis , Fur , IHF , NsrR , PdhR view
  pdhR PdhR DNA-binding transcriptional dual regulator pdhR-aceEF-lpd CRP , Cra , FNR , PdhR view
  rsmH 16S rRNA m4C1402 methyltransferase mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC MraZ , PdhR view
  tomB protein that modulates Hha toxicity tomB-hha BasR , CpxR , PdhR view
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