RegulonDB RegulonDB 11.1:Coexpression
   


Gene Coexpression in Escherichia coli K-12 genome


 

This section aims to give an overview of different features that are known about the query genes, such as their transcriptional regulation, their gene product, the operon to which they belong and the description of gene ontologies they are associated to. In the case one or more of the input genes are not found in our database, they will appear under the section "gene (s) not found". The table can be sorted by any of the features by clicking icon attached to the name of the feature´s associated column.

Query size: 21 gene(s)


  Gene name Product Operon Gene regulation GOs list
  appA periplasmic protein with phosphoanhydride phosphatase and multiple inositol-polyphosphate phosphatase activity appCBXA AppY , ArcA , YdeO view
  appB cytochrome bd-II terminal oxidase subunit II appCBXA AppY , ArcA , YdeO view
  appC cytochrome bd-II terminal oxidase subunit I appCBXA AppY , ArcA , YdeO view
  appX small outer membrane protein appCBXA AppY , ArcA , YdeO view
  dctR predicted DNA-binding transcriptional regulator slp-dctR GadW , GadX , MarA , YdeO view
  gadE GadE DNA-binding transcriptional activator gadEF-mdtEF ArcA , CRP , EvgA , FliZ , GadE , GadW , GadX , PhoP , YdeO view
  gadF small regulatory RNA GadF gadEF-mdtEF ArcA , CRP , EvgA , FliZ , GadE , GadW , GadX , PhoP , YdeO nd
  gadW GadW DNA-binding transcriptional dual regulator gadAXW FNR , GadE , GadW , GadX , PhoB , PhoP , RutR , SdiA , YdeO view
  hyaA hydrogenase 1, small subunit hyaABCDEF AppY , ArcA , Fis , IscR , NarL , NarP , YdeO view
  hyaB hydrogenase 1, large subunit hyaABCDEF AppY , ArcA , Fis , IscR , NarL , NarP , YdeO view
  hyaC hydrogenase 1, b-type cytochrome subunit hyaABCDEF AppY , ArcA , Fis , IscR , NarL , NarP , YdeO view
  hyaD protein involved in processing of HyaA and HyaB proteins hyaABCDEF AppY , ArcA , Fis , IscR , NarL , NarP , YdeO view
  hyaE protein involved in quality control of HyaA hyaABCDEF AppY , ArcA , Fis , IscR , NarL , NarP , YdeO view
  hyaF protein involved in nickel incorporation into hydrogenase 1 proteins hyaABCDEF AppY , ArcA , Fis , IscR , NarL , NarP , YdeO view
  mdtE MdtEF-TolC multidrug efflux pump - membrane fusion protein gadEF-mdtEF CRP , EvgA , FliZ , GadE , GadW , GadX , YdeO view
  mdtF MdtEF-TolC multidrug efflux pump - permease subunit gadEF-mdtEF CRP , EvgA , FliZ , GadE , GadW , GadX , YdeO view
  safA two-component system connector protein safA-ydeO EvgA , PhoP , RcsB , YdeO view
  slp starvation lipoprotein slp-dctR GadW , GadX , MarA , YdeO view
  uspD stress protein involved in resistance to UV irradiation yiiS-uspD YdeO view
  ydeO YdeO DNA-binding transcriptional dual regulator safA-ydeO EvgA , PhoP , RcsB , YdeO view
  yiiS conserved protein yiiS-uspD YdeO nd
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