RegulonDB RegulonDB 10.10:Coexpression
   


Gene Coexpression in Escherichia coli K-12 genome


 

This section aims to give an overview of different features that are known about the query genes, such as their transcriptional regulation, their gene product, the operon to which they belong and the description of gene ontologies they are associated to. In the case one or more of the input genes are not found in our database, they will appear under the section "gene (s) not found". The table can be sorted by any of the features by clicking icon attached to the name of the feature´s associated column.

Query size: 27 gene(s)


  Gene name Product Operon Gene regulation GOs list
  bolA BolA DNA-binding transcriptional dual regulator bolA OmpR view
  cadA lysine decarboxylase 1 cadBA ArcA , CadC , GadX , Lrp view
  cadB lysine:cadaverine antiporter cadBA ArcA , CadC , GadX , Lrp view
  cadC CadC DNA-binding transcriptional activator cadC CadC , FNR , LeuO , MlrA view
  csgD CsgD DNA-binding transcriptional dual regulator csgDEFG BasR , CRP , CpxR , Cra , CsgD , FliZ , IHF , MlrA , MqsA , OmpR , RcdA , RcsAB , RstA view
  csgE curli transport specificity factor csgDEFG BasR , CRP , CpxR , Cra , CsgD , FliZ , IHF , MlrA , MqsA , OmpR , RcdA , RcsAB , RstA view
  csgF curli assembly component csgDEFG BasR , CRP , CpxR , Cra , CsgD , FliZ , IHF , MlrA , MqsA , OmpR , RcdA , RcsAB , RstA view
  csgG curli secretion channel csgDEFG BasR , CRP , CpxR , Cra , CsgD , FliZ , IHF , MlrA , MqsA , OmpR , RcdA , RcsAB , RstA view
  dtpA tripeptide / dipeptide:H+ symporter DtpA dtpA OmpR view
  ecnB bacteriolytic entericidin B lipoprotein ecnAB OmpR view
  fadL long-chain fatty acid outer membrane porin; bacteriophage T2 receptor fadL ArcA , CRP , FadR , OmpR , PhoP view
  feoA ferrous iron transport protein A feoABC FNR , Fur , NagC view
  feoB Fe2+ transporter FeoB feoABC FNR , Fur , NagC view
  feoC predicted DNA-binding transcriptional regulator feoABC FNR , Fur , NagC view
  flhC FlhC transcriptional dual regulator flhDC AcrR , CRP , FliZ , Fur , HdfR , IHF , LrhA , MatA , OmpR , QseB , RcsAB , YjjQ view
  flhD FlhD transcriptional dual regulator flhDC AcrR , CRP , FliZ , Fur , HdfR , IHF , LrhA , MatA , OmpR , QseB , RcsAB , YjjQ view
  micF MicF micF AcrR , HU , IHF , Lrp , MarA , OmpR , Rob , SoxS view
  nmpC outer membrane porin protein; locus of qsr prophage nmpC CRP , IHF , MprA , OmpR view
  ompC outer membrane protein C ompC CpxR , EnvY , IHF , Lrp , OmpR , YjjQ view
  ompF outer membrane porin F ompF CRP , CpxR , EnvY , Fur , IHF , OmpR , PhoB , RstA view
  omrA OmrA omrA OmpR view
  omrB OmrB omrB OmpR view
  pgaA partially N-deacetylated poly-β-1,6-N-acetyl-D-glucosamine outer membrane porin pgaABCD NhaR , OmpR view
  pgaB poly-β-1,6-N-acetyl-D-glucosamine N-deacetylase pgaABCD NhaR , OmpR view
  pgaC poly-β-1,6-N-acetyl-D-glucosamine synthase - PgaC subunit pgaABCD NhaR , OmpR view
  pgaD poly-β-1,6-N-acetyl-D-glucosamine synthase - PgaD subunit pgaABCD NhaR , OmpR view
  sra 30S ribosomal subunit protein S22 bdm-sra Fis , IHF , OmpR , RcsB view
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