RegulonDB

This section allows the user to display the top 50 genes that are most highly coexpressed with each query gene. Each tab that is displayed represents one of the query genes. Within each tab or gene two sections are shown for this gene, the first section being "GENE INFORMATION" displaying information about the transcriptional regulation of that gene, and the second section being "THE TOP 50 COEXPRESSED GENES" showing the top 50 genes most highly coexpressed with that gene and their information on transcriptional regulation.
For more details of the coexpression method see the user guide.

This section aims to give an overview of different features that are known about the query genes, such as their transcriptional regulation, their gene product, the operon to which they belong and the description of gene ontologies they are associated to. In the case one or more of the input genes are not found in our database, they will appear under the section "gene (s) not found". The table can be sorted by any of the features by clicking icon attached to the name of the feature´s associated column.

Query size: 37 gene(s)

Gene name	Product	Operon	Gene regulation	GOs list
chbA	chitobiose PTS permease - ChbA subunit	chbBCARFG	CRP , ChbR , NagC	view
chbB	chitobiose PTS permease - ChbB subunit	chbBCARFG	CRP , ChbR , NagC	view
chbC	chitobiose PTS permease - ChbC subunit	chbBCARFG	CRP , ChbR , NagC	view
chbF	monoacetylchitobiose-6-phosphate hydrolase	chbBCARFG	CRP , ChbR , NagC	view
chbG	chito-oligosaccharide mono-deacetylase	chbBCARFG	CRP , ChbR , NagC	view
chbR	ChbR DNA-binding transcriptional dual regulator	chbBCARFG	CRP , ChbR , NagC	view
chiP	chitobiose outer membrane channel	chiP-ybfN	CRP , NagC	view
ybfN	uncharacterized lipoprotein YbfN	chiP-ybfN	CRP , NagC	view
creA	conserved protein	creABCD	NagC	view
creB	CreB transcriptional regulator	creABCD	NagC	view
creC	CreC	creABCD	NagC	view
creD	predicted inner membrane protein	creABCD	CreB , NagC	view
crr	Enzyme IIA^Glc; Crr	ptsHI-crr	CRP , Cra , Mlc , NagC	view
dinI	DNA damage-inducible protein I	dinI	LexA , NagC	view
feoA	ferrous iron transport protein A	feoABC	FNR , Fur , NagC	view
feoB	Fe²⁺ transporter FeoB	feoABC	FNR , Fur , NagC	view
feoC	predicted DNA-binding transcriptional regulator	feoABC	FNR , Fur , NagC	view
fimB	regulator for fimA	fimB	BasR , IHF , NagC , NanR	view
galP	galactose:H⁺ symporter	galP	CRP , GalR , GalS , NagC	view
glmS	L-glutamine:D-fructose-6-phosphate aminotransferase	glmUS	NagC	view
glmU	fused N-acetylglucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyltransferase	glmUS	NagC	view
manX	mannose PTS permease - ManX subunit	manXYZ	CRP , Cra , Mlc , NagC	view
manY	mannose PTS permease - ManY subunit	manXYZ	CRP , Cra , Mlc , NagC	view
manZ	mannose PTS permease - ManZ subunit	manXYZ	CRP , Cra , Mlc , NagC	view
nagA	N-acetylglucosamine-6-phosphate deacetylase	nagBAC-umpH	CRP , NagC , PhoP	view
nagB	glucosamine-6-phosphate deaminase	nagBAC-umpH	CRP , NagC	view
nagC	NagC DNA-binding transcriptional dual regulator	nagBAC-umpH	CRP , NagC	view
nagE	N-acetylglucosamine PTS permease	nagE	CRP , NagC	view
nanC	N-acetylneuraminic acid outer membrane channel	nanCMS	CRP , NagC , NanR	view
nanM	N-acetylneuraminate mutarotase	nanCMS	CRP , NagC , NanR	view
nanS	probable 9-O-acetyl-N-acetylneuraminate esterase	nanCMS	CRP , NagC , NanR	view
ptsH	HPr	ptsHI-crr	CRP , Cra , Mlc , NagC	view
ptsI	PTS enzyme I	ptsHI-crr	CRP , Cra , Mlc , NagC	view
umpH	UMP phosphatase	nagBAC-umpH	CRP , NagC	view
ydeM	predicted anaerobic sulfatase maturation enzyme	ydeNM	AraC , NagC	view
ydeN	putative sulfatase	ydeNM	AraC , NagC	view
ydeP	acid resistance protein	ydeP	EvgA , NagC , NarL , NarP , PhoP , RcsB , UvrY	view