RegulonDB RegulonDB 10.10:Coexpression
   


Gene Coexpression in Escherichia coli K-12 genome


 

This section aims to give an overview of different features that are known about the query genes, such as their transcriptional regulation, their gene product, the operon to which they belong and the description of gene ontologies they are associated to. In the case one or more of the input genes are not found in our database, they will appear under the section "gene (s) not found". The table can be sorted by any of the features by clicking icon attached to the name of the feature´s associated column.

Query size: 32 gene(s)


  Gene name Product Operon Gene regulation GOs list
  acnA aconitate hydratase 1 acnA ArcA , CRP , Cra , FNR , MarA , Rob , SoxS view
  acrA AcrAB-TolC multidrug efflux pump - membrane fusion protein acrAB AcrR , EnvR , MarA , MprA , PhoP , Rob , SoxS view
  acrB AcrAB-TolC multidrug efflux pump - permease subunit acrAB AcrR , EnvR , MarA , MprA , PhoP , Rob , SoxS view
  acrZ small membrane protein that interacts with the AcrAB-TolC multidrug efflux pump acrZ MarA , Rob , SoxS view
  aldA aldehyde dehydrogenase A aldA ArcA , CRP , DnaA , FNR view
  aslB predicted anaerobic sulfatase maturation enzyme aslB Rob view
  chaC predicted glutathione-specific gamma-glutamylcyclotransferase chaBC nd view
  elaB conserved protein elaB nd view
  fadA 3-ketoacyl-CoA thiolase fadBA ArcA , FadR , Fis view
  fadB dodecenoyl-CoA δ-isomerase, enoyl-CoA hydratase, 3-hydroxybutyryl-CoA epimerase, 3-hydroxyacyl-CoA dehydrogenase fadBA ArcA , FadR , Fis view
  fadL long-chain fatty acid outer membrane porin; bacteriophage T2 receptor fadL ArcA , CRP , FadR , OmpR , PhoP view
  fumC fumarase C fumAC ArcA , CRP , FNR , Fur , MarA , Rob , SoxR , SoxS view
  inaA pH-inducible protein involved in stress response inaA MarA , Rob , SoxS view
  ldtB L,D-transpeptidase YbiS ldtB CRP , Rob view
  marA MarA DNA-binding transcriptional dual regulator marRAB AcrR , CRP , CpxR , Cra , Fis , MarA , MarR , Rob , SoxS view
  marB multiple antibiotic resistance protein marRAB AcrR , CRP , CpxR , Cra , Fis , MarA , MarR , Rob , SoxS view
  marR MarR DNA-binding transcriptional repressor marRAB AcrR , CRP , CpxR , Cra , Fis , MarA , MarR , Rob , SoxS view
  micF MicF micF AcrR , HU , IHF , Lrp , MarA , OmpR , Rob , SoxS view
  mltF membrane-bound lytic murein transglycosylase F mltF Rob view
  nfo endonuclease IV nfo MarA , Rob , SoxS view
  nfsA NADPH nitroreductase NfsA ybjC-nfsA-rimK-ybjN MarA , OxyR , Rob , SoxS view
  nfsB NAD(P)H nitroreductase NfsB nfsB MarA , Rob , SoxS view
  rimK ribosomal protein S6 modification protein ybjC-nfsA-rimK-ybjN MarA , OxyR , Rob , SoxS view
  rob Rob DNA-binding transcriptional dual regulator rob MarA , Rob , SoxS view
  sodA superoxide dismutase (Mn) sodA ArcA , CRP , FNR , Fur , IHF , MarA , Rob , SoxS view
  tolC TolC outer membrane channel tolC-ygiABC MarA , PhoP , Rob , SoxS view
  ybjC predicted inner membrane protein ybjC-nfsA-rimK-ybjN MarA , OxyR , Rob , SoxS nd
  ybjN predicted oxidoreductase ybjC-nfsA-rimK-ybjN MarA , OxyR , Rob , SoxS view
  ygiB conserved outer membrane protein tolC-ygiABC MarA , PhoP , Rob , SoxS view
  ygiC predicted enzyme with ATPase activity tolC-ygiABC MarA , PhoP , Rob , SoxS view
  yiaG predicted transcriptional regulator yiaG nd view
  zwf glucose-6-phosphate dehydrogenase (NADP+) zwf Cra , FNR , Fur , MarA , Rob , SoxS view
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