RegulonDB RegulonDB 10.10:Coexpression
   


Gene Coexpression in Escherichia coli K-12 genome


 

This section aims to give an overview of different features that are known about the query genes, such as their transcriptional regulation, their gene product, the operon to which they belong and the description of gene ontologies they are associated to. In the case one or more of the input genes are not found in our database, they will appear under the section "gene (s) not found". The table can be sorted by any of the features by clicking icon attached to the name of the feature´s associated column.

Query size: 28 gene(s)


  Gene name Product Operon Gene regulation GOs list
  csgA curlin, major subunit csgBAC CpxR , CsgD , FliZ view
  csgB curlin, minor subunit csgBAC CpxR , CsgD , FliZ view
  csgC inhibitor of CsgA amyloid formation csgBAC CpxR , CsgD , FliZ view
  csgD CsgD DNA-binding transcriptional dual regulator csgDEFG BasR , CRP , CpxR , Cra , CsgD , FliZ , IHF , MlrA , MqsA , OmpR , RcdA , RcsAB , RstA view
  csgE curli transport specificity factor csgDEFG BasR , CRP , CpxR , Cra , CsgD , FliZ , IHF , MlrA , MqsA , OmpR , RcdA , RcsAB , RstA view
  csgF curli assembly component csgDEFG BasR , CRP , CpxR , Cra , CsgD , FliZ , IHF , MlrA , MqsA , OmpR , RcdA , RcsAB , RstA view
  csgG curli secretion channel csgDEFG BasR , CRP , CpxR , Cra , CsgD , FliZ , IHF , MlrA , MqsA , OmpR , RcdA , RcsAB , RstA view
  dgcC diguanylate cyclase dgcC CsgD view
  flgM anti-sigma factor for FliA (σ28) flgAMN CsgD , FlhDC view
  flgN flagellar biosynthesis protein FlgN flgAMN CsgD , FlhDC view
  fliA RNA polymerase, sigma 28 (sigma F) factor fliAZ-tcyJ CsgD , FlhDC , MatA , NsrR , SutR view
  fliE flagellar basal-body protein FliE fliE CsgD , FlhDC view
  fliF flagellar M-ring protein FliF; basal-body MS(membrane and supramembrane)-ring and collar protein fliFGHIJK CsgD , FlhDC view
  fliG flagellar motor switch protein FliG fliFGHIJK CsgD , FlhDC view
  fliH flagellar biosynthesis protein FliH fliFGHIJK CsgD , FlhDC view
  fliI flagellum-specific ATP synthase FliI fliFGHIJK CsgD , FlhDC view
  fliJ flagellar biosynthesis protein FliJ fliFGHIJK CsgD , FlhDC view
  fliK flagellar hook-length control protein FliK fliFGHIJK CsgD , FlhDC view
  fliZ FliZ DNA-binding transcriptional regulator fliAZ-tcyJ CsgD , FlhDC , MatA , NsrR , SutR view
  iraP anti-adaptor protein for σS stabilization iraP CsgD view
  nlpA lipoprotein-28 nlpA CsgD view
  pepD peptidase D pepD CsgD view
  tcyJ cystine/cysteine ABC transporter - periplasmic binding protein fliAZ-tcyJ CsgD , CysB , FlhDC , MatA , NsrR , SutR view
  yhbT predicted lipid carrier protein yhbTS CsgD view
  wrbA NAD(P)H:quinone oxidoreductase wrbA-yccJ CsgD view
  yccJ putative protein wrbA-yccJ CsgD view
  yccT conserved protein yccT CsgD view
  yhbS predicted acyltransferase with acyl-CoA N-acyltransferase domain yhbTS CsgD view
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