RegulonDB RegulonDB 10.10:Coexpression
   


Gene Coexpression in Escherichia coli K-12 genome


 

This section aims to give an overview of different features that are known about the query genes, such as their transcriptional regulation, their gene product, the operon to which they belong and the description of gene ontologies they are associated to. In the case one or more of the input genes are not found in our database, they will appear under the section "gene (s) not found". The table can be sorted by any of the features by clicking icon attached to the name of the feature´s associated column.

Query size: 46 gene(s)


  Gene name Product Operon Gene regulation GOs list
  ccmA ABC complex for formation and release of holoCcmE - ATP binding subunit napFDAGHBC-ccmABCDEFGH FNR , FlhDC , ModE , NarL , NarP view
  ccmB ABC complex for formation and release of holoCcmE - membrane subunit CcmB napFDAGHBC-ccmABCDEFGH FNR , FlhDC , ModE , NarL , NarP view
  ccmC ABC complex for formation and release of holoCcmE - membrane subunit CcmC napFDAGHBC-ccmABCDEFGH FNR , FlhDC , ModE , NarL , NarP view
  ccmD ABC complex for formation and release of holoCcmE - membrane subunit CcmD napFDAGHBC-ccmABCDEFGH FNR , FlhDC , ModE , NarL , NarP view
  ccmE membrane anchored periplasmic heme chaperone CcmE napFDAGHBC-ccmABCDEFGH FNR , FlhDC , ModE , NarL , NarP view
  ccmF holocytochrome c synthetase - CcmF subunit napFDAGHBC-ccmABCDEFGH FNR , FlhDC , ModE , NarL , NarP view
  ccmG holocytochrome c synthetase - thiol:disulfide oxidoreductase CcmG napFDAGHBC-ccmABCDEFGH FNR , FlhDC , ModE , NarL , NarP view
  ccmH holocytochrome c synthetase - thiol:disulfide oxidoreductase CcmH napFDAGHBC-ccmABCDEFGH FNR , FlhDC , ModE , NarL , NarP view
  deoA thymidine phosphorylase / uracil phosphorylase deoCABD CRP , CytR , DeoR , Fis , ModE view
  deoB phosphopentomutase deoCABD CRP , CytR , DeoR , Fis , ModE view
  deoC deoxyribose-phosphate aldolase deoCABD CRP , CytR , DeoR , Fis , ModE view
  deoD purine nucleoside phosphorylase deoCABD CRP , CytR , DeoR , Fis , ModE view
  dmsA dimethyl sulfoxide reductase, chain A dmsABC FNR , Fis , IHF , ModE , NarL view
  dmsB dimethyl sulfoxide reductase, chain B dmsABC FNR , Fis , IHF , ModE , NarL view
  dmsC dimethyl sulfoxide reductase, chain C dmsABC FNR , Fis , IHF , ModE , NarL view
  hycA regulator of the transcriptional regulator FhlA hycABCDEFGHI FhlA , IHF , ModE , NsrR view
  hycB hydrogenase 3, Fe-S subunit hycABCDEFGHI FhlA , IHF , ModE , NsrR view
  hycC hydrogenase 3, membrane subunit hycABCDEFGHI FhlA , IHF , ModE , NsrR view
  hycD hydrogenase 3, membrane subunit hycABCDEFGHI FhlA , IHF , ModE , NsrR view
  hycE hydrogenase 3, large subunit hycABCDEFGHI FhlA , IHF , ModE , NsrR view
  hycF formate hydrogenlyase complex iron-sulfur protein hycABCDEFGHI FhlA , IHF , ModE , NsrR view
  hycG hydrogenase 3 and formate hydrogenlyase complex, HycG subunit hycABCDEFGHI FhlA , IHF , ModE , NsrR view
  hycH protein required for maturation of hydrogenase 3 hycABCDEFGHI FhlA , IHF , ModE , NsrR view
  hycI hydrogenase 3 maturation protease hycABCDEFGHI FhlA , IHF , ModE , NsrR view
  moaA GTP 3',8'-cyclase moaABCDE CueR , FNR , ModE view
  moaB MoaB protein moaABCDE CueR , FNR , ModE view
  moaC cyclic pyranopterin monophosphate synthase moaABCDE CueR , FNR , ModE view
  moaD molybdopterin synthase small subunit moaABCDE CueR , FNR , ModE view
  moaE molybdopterin synthase large subunit moaABCDE CueR , FNR , ModE view
  modA molybdate ABC transporter - periplasmic binding protein modABC CRP , ModE view
  modB molybdate ABC transporter - membrane subunit modABC CRP , ModE view
  modC molybdate ABC transporter - ATP binding subunit modABC CRP , ModE view
  napA large subunit of periplasmic nitrate reductase, molybdoprotein napFDAGHBC-ccmABCDEFGH FNR , FlhDC , IscR , ModE , NarL , NarP view
  napB subunit of periplasmic nitrate reductase, cytochrome c550 protein napFDAGHBC-ccmABCDEFGH FNR , FlhDC , IscR , ModE , NarL , NarP view
  napC periplasmic nitrate reductase, cytochrome c protein napFDAGHBC-ccmABCDEFGH FNR , FlhDC , IscR , ModE , NarL , NarP view
  napD signal peptide-binding chaperone for NapA napFDAGHBC-ccmABCDEFGH FNR , FlhDC , IscR , ModE , NarL , NarP view
  napF ferredoxin-type protein napFDAGHBC-ccmABCDEFGH FNR , FlhDC , IscR , ModE , NarL , NarP view
  napG ferredoxin-type protein napFDAGHBC-ccmABCDEFGH FNR , FlhDC , IscR , ModE , NarL , NarP view
  napH ferredoxin-type protein napFDAGHBC-ccmABCDEFGH FNR , FlhDC , IscR , ModE , NarL , NarP view
  narL NarL DNA-binding transcriptional dual regulator narXL FNR , ModE view
  narX NarX narXL FNR , ModE view
  oppA peptide ABC transporter - periplasmic binding protein oppABCDF ArcA , Fur , Lrp , ModE view
  oppB murein tripeptide ABC transporter / peptide ABC transporter - putative membrane subunit oppABCDF ArcA , Fur , Lrp , ModE view
  oppC murein tripeptide ABC transporter / peptide ABC transporter - putative membrane subunit oppABCDF ArcA , Fur , Lrp , ModE view
  oppD murein tripeptide ABC transporter / peptide ABC transporter - putative ATP binding subunit oppABCDF ArcA , Fur , Lrp , ModE view
  oppF murein tripeptide ABC transporter / peptide ABC transporter - putative ATP binding subunit oppABCDF ArcA , Fur , Lrp , ModE view
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