RegulonDB RegulonDB 10.7: Sigmulon Form
   

Sigma32 Sigmulon in Escherichia coli K-12 genome




Sigma32 Signal transduction, see details.




Sigma Factor      
Name: Sigma32      Signal transduction
Synonyms: RpoH
Gene name: rpoH
Sigmulon regulators:
Sigmulon Genes:


Transcribed promoters    
  Promoter Name TSS Position Transcribed Gene(s) Distance from TSS
to gene
Promoter Sequence Box
(-10)
Box
(-35)
Evidence Code(s) Reference(s)
  ackAp 2413459 ackA 11 ggtgtcatcatgcgctacgctctatggctccctgacgtttttttagccacgtatcaattaTaggtacttccatgtcgagta
                         -35                 -10            +1                   
AGCCAC TGGCTC [AIPP] [1]
[2]
  adiCp7 4337202 adiC 171 acagtacgtcgtactttatttctgtctttaaagacttctacggtatgacgccgctgcattAtgttagtcagcacagagaac
                          -35                    -10        +1                   
CGCCGC CTTTAAA [ICWHO] [3]
  alaAp9 2407408 alaA 153 aagaatcagaacaattcactatataacattgcatgtaaagcatatacacctcattattttGtcattattaagttattaaca
                            -35                  -10        +1                   
CCTCAT ATTGCAT [ICWHO] [3]
  bssSp1 1121058 bssS 103 gctgttttattgttcatataaatcttaaaagcagaaatttatctgtttccccctttaaaaAttcggtgaatacccttactt
                                -35               -10       +1                   
CCCCTT CAGAAA [AIPP]
[IDA]
[IEP]
[4]
[5]
  bssSp2 1121032 bssS 77 aaaagcagaaatttatctgtttccccctttaaaaattcggtgaatacccttacttattggTatactgaagttgcttcagat
                            -35               -10           +1                   
ACCCTT TTTAAA [AIPP]
[IDA]
[IEP]
[TIM]
[6]
[4]
[5]
  canp 142703 can 33 ttacgttcttacactttatctgtggtttaaatcgtcccggagttgccctatattagccaaAcgtaattatttggttacagg
    [AIPP]
[HTIM]
[IDA]
[RS-EPT-CBR]
[7]
[6]
[8]
  casDp null cas2, cas1, casE, casD       [IDA]
[IEP]
[4]
  clpBp 2734205 clpB 32 ttttcacattaatctggtcaataaccttgaataattgagggatgacctcatttaatctccAgtagcaactttgatccgtta
                           -35                -10           +1                   
CCTCAT TTGAAT [AIPP]
[HIPP]
[IDA]
[IEP]
[RS-EPT-CBR]
[TIM]
[9]
[6]
[8]
[10]
[4]
  clpBp 2734205 clpB 32 ttttcacattaatctggtcaataaccttgaataattgagggatgacctcatttaatctccAgtagcaactttgatccgtta
                           -35                       -10    +1                   
TAATCT TTGAAT [AIPP]
[HIPP]
[IDA]
[IEP]
[RS-EPT-CBR]
[TIM]
[9]
[6]
[8]
[10]
[4]
  clpPp3 456605 clpP, clpX 72 gcgtaacaacaaaagattgttatgcttgaaatatggtgatgccgtacccataacacagggActagctgataatccgtccat
                          -35                 -10           +1                   
ACCCAT TTGAAA [IDA]
[IEP]
[RS-EPT-CBR]
[TIM]
[TIM]
[11]
[6]
[8]
[4]
  creAp2 4635243 creA, creB, creC 278 ttaaacattctctgtaagtgccacttggaataacctgctttcgccgctacattgtcgagcGacaggggctgatccagatga
                         -35                 -10            +1                   
CGCTAC TTGGAA [HIPP]
[TIM]
[6]
  dnaKp1 12048 dnaK, tpke11, dnaJ 115 gcacaaaaaatttttgcatctcccccttgatgacgtggtttacgaccccatttagtagtcAaccgcagtgagtgagtctgc
                           -35                -10           +1                   
CCCCAT TTGATG [HIPP]
[IDA]
[IEP]
[RS-EPT-CBR]
[TIM]
[12]
[6]
[8]
[4]
[13]
[14]
  dnaKp2 12123 dnaK, tpke11, dnaJ 40 gtctgcaaaaaaatgaaattgggcagttgaaaccagacgtttcgcccctattacagactcAcaaccacatgatgaccgaat
                           -35                -10           +1                   
CCCTAT TTGAAA [HIPP]
[IDA]
[IEP]
[TIM]
[12]
[6]
[4]
[13]
[14]
  dnaKp3 12144 dnaK, tpke11, dnaJ 19 ggcagttgaaaccagacgtttcgcccctattacagactcacaaccacatgatgaccgaatAtatagtggagacgtttagat
                          -35               -10             +1                   
CCACAT CCTATT [HIPP]
[IDA]
[IEP]
[TIM]
[12]
[4]
[13]
[14]
  fruRp8 87947 cra 81 cgttgggctttttttgcgaaatcagtgggaacctggaataaaagcagttgccgcagttaaTtttctgcgcttagatgttaa
                                 -35               -10      +1                   
CCGCAG CTGGAAT [ICWHO] [3]
  fxsAp 4368603 fxsA 61 ctaccaaaaatagttgcgcaaacatcttgaaattttgctaatgaccacaatataagctaaAcgcgattcgcaacccattca
                           -35               -10            +1                   
CCACAA TTGAAA [AIPP]
[HIPP]
[IDA]
[IEP]
[TIM]
[6]
[4]
[15]
  gapAp2 1862618 gapA, yeaD 153 atcacatttttatcgtaattgccctttaaaattcggggcgccgaccccatgtggtctcaaGcccaaaggaagagtgaggcg
                         -35                 -10            +1                   
CCCCAT TTTAAA [AIPP]
[HIPP]
[IDA]
[TIM]
[16]
[17]
[6]
[18]
[4]
  glnSp2 705999 glnS 94 aagcggtggagatcttctctgccgctttttttttcatcaatcatccccataatccttgttAgattatcaattttaaaaaac
                          -35                   -10         +1                   
CATAAT TTTTTT [IDA] [6]
  glnSp2 705999 glnS 94 aagcggtggagatcttctctgccgctttttttttcatcaatcatccccataatccttgttAgattatcaattttaaaaaac
                          -35                -10            +1                   
CCCCAT TTTTTT [IDA] [6]
  groSp 4370616 groS, groL 72 cagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctctggtcAccagccgggaaaccacgtaa
                         -35                    -10         +1                   
CATTTC TTGAAG [AIPP]
[HIPP]
[IDA]
[IEP]
[RS-EPT-CBR]
[12]
[6]
[8]
[4]
[13]
[19]
[20]
  groSp 4370616 groS, groL 72 cagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctctggtcAccagccgggaaaccacgtaa
                         -35                 -10            +1                   
CCCCAT TTGAAG [AIPP]
[HIPP]
[IDA]
[IEP]
[RS-EPT-CBR]
[12]
[6]
[8]
[4]
[13]
[19]
[20]
  grpEp 2750747 grpE 39 gattgatgacaatgtgagtgcttcccttgaaaccctgaaactgatccccataataagcgaAgttagcgagatgaatgcgaa
                           -35                -10           +1                   
CCCCAT TTGAAA [AIPP]
[HIPP]
[IDA]
[IEP]
[RS-EPT-CBR]
[TIM]
[21]
[6]
[8]
[4]
  hepAp2 63588 rapA 324 agaaaaccaaaagcgtggtcgccccttgcaatatcagaatcgcggcaccattaagtacgtAtggaccaccaacggcccgga
                         -35                  -10           +1                   
CACCAT CTTGCA [HIPP]
[IDA]
[IEP]
[RS-EPT-CBR]
[TIM]
[6]
[8]
[4]
  hepAp2 63588 rapA 324 agaaaaccaaaagcgtggtcgccccttgcaatatcagaatcgcggcaccattaagtacgtAtggaccaccaacggcccgga
                          -35                 -10           +1                   
CACCAT TTGCAA [HIPP]
[IDA]
[IEP]
[RS-EPT-CBR]
[TIM]
[6]
[8]
[4]
  hfqp1 null hfq, hflX, hflK, hflC       [HIPP]
[IDA]
[IEP]
[TIM]
[22]
  holCp 4484273 valS, holC -7 cgctgcggtgtatacctgatgcgtatttaaatccaccacaagaagccccatttatgaaaaAcgcgacgttctaccttctgg
                          -35                 -10           +1                   
CCCCAT TTTAAA [AIPP]
[IDA]
[IEP]
[TIM]
[6]
[4]
  hslRp 3529110 hslR, hslO 238 gagcataccggtctggacgcacaccttgatttattactttccacccacacatttggttatCcgaaagaggatcagcggtta
                          -35              -10              +1                   
ACCCAC TTGATT [AIPP]
[TIM]
[6]
  hslVp 4122354 hslU, hslV 67 atacaaactgcattcggctcgccgccgggggttgaaaccctcaaaatcccccccatctatAattgcattatgccccgtact
                                -35                -10      +1                   
CCCCAT TTGAAA [AIPP]
[HIPP]
[IDA]
[IEP]
[TIM]
[23]
[6]
[4]
[13]
  hspQp null hspQ       [IDA]
[IEP]
[4]
  htgAp1 10644 mbiA 186 gtggggcagtgtctacgatcttttgaggggaaaatgaaaattttccccggtttccggtatCagacctgagtggcgctaacc
    [HIPP]
[TIM]
[24]
[25]
  htpGp1 495075 htpG 45 acgagagcaggatcacctgctctcgcttgaaattattctcccttgtccccatctctcccaCatcctgtttttaaccttaaa
                           -35                 -10          +1                   
CCCCAT TTGAAA [AIPP]
[HIPP]
[IDA]
[IEP]
[TIM]
[26]
[12]
[6]
[4]
[14]
  htpGp2 495084 htpG 36 ggatcacctgctctcgcttgaaattattctcccttgtccccatctctcccacatcctgttTttaaccttaaaatggcatta
                                 -35             -10        +1                   
CCACAT CTTGTC [AIPP]
[HIPP]
[IDA]
[IEP]
[TIM]
[12]
[6]
[4]
[14]
  htpXp 1912618 htpX 42 tctggtgacttacgcactatccagacttgaaaatagtcgcgtaacccatacgatgtgggtAtcgcatattgcgttttgtta
                           -35              -10             +1                   
ACCCAT TTGAAA [AIPP]
[HIPP]
[IDA]
[IEP]
[RS-EPT-CBR]
[TIM]
[27]
[6]
[8]
[4]
  ibpAp 3867518 ibpB, ibpA 96 tgcaaaaaaaagtccgctgataaggcttgaaaagttcatttccagacccatttttacatcGtagccgatgaggacgcgcct
                           -35                -10           +1                   
ACCCAT TTGAAA [AIPP]
[HIPP]
[IDA]
[IEP]
[TIM]
[28]
[23]
[29]
[30]
[6]
[4]
  ileSp3 22229 ileS, lspA, fkpB, ispH 162 cagctggaagtgcatttgttagatgttgcaatggacctttacggtcgccatatacaagtaGtgctgcgtaaaaaaatacgc
                          -35                 -10           +1                   
CGCCAT TTGCAA [AIPP]
[RS-EPT-CBR]
[TIM]
[6]
[8]
  lapAp1 1340135 lapA, lapB, pyrF, yciH 108 aacgagaacaagaaagttaacgctggttgattttccgaatttagcccttaaatcatcaacAatgcgtgtggatgccatttc
                           -35                     -10      +1                   
AATCAT TTGATT [AIPP]
[IDA]
[IEP]
[TIM]
[31]
[6]
[4]
  lapAp1 1340135 lapA, lapB, pyrF, yciH 108 aacgagaacaagaaagttaacgctggttgattttccgaatttagcccttaaatcatcaacAatgcgtgtggatgccatttc
                          -35               -10             +1                   
GCCCTT GTTGATT [AIPP]
[IDA]
[IEP]
[TIM]
[31]
[6]
[4]
  ldhAp 1442915 ldhA 72 gaaggttgcgcctacactaagcatagttgttgatgaatttttcaatatcgccatagctttCaattaaatttgaaattttgt
                              -35                -10        +1                   
CGCCAT TTGATG [AIPP]
[IDA]
[IEP]
[32]
[4]
[5]
  lonp 458815 lon 73 taatttttcctctattctcggcgttgaatgtgggggaaacatccccatatactgacgtacAtgttaatagatggcgtgaag
                        -35                -10              +1                   
CCCCAT TTGAAT [HIPP]
[IDA]
[IEP]
[RS-EPT-CBR]
[33]
[6]
[8]
[4]
  lonp 458815 lon 73 taatttttcctctattctcggcgttgaatgtgggggaaacatccccatatactgacgtacAtgttaatagatggcgtgaag
                        -35                     -10         +1                   
TATACT TTGAAT [HIPP]
[IDA]
[IEP]
[RS-EPT-CBR]
[33]
[6]
[8]
[4]
  metAp1 4214233 metA 47 aactttctcaccttcaacatgcaggctcgacattggcaaattttctggttatcttcagctAtctggatgtctaaacgtata
                                  -35                -10    +1                   
CTTCAG TGGCAA [RS-EPT-CBR]
[TIM]
[TIM]
[34]
[35]
[8]
  mhpTp 375386 mhpT 73 acacgactgccggatgcgataaacgtcttgtccggcctacatttcgcccgtaggcagtcaTtaaatagttctgattacgcg
                            -35              -10            +1                   
CGCCCG TTGTCC [AIPP] [1]
  miaAp2 4398982 miaA, hfq, hflX, hflK, hflC 270 agtctgccctggcggaattgggtattgatttccagtcagatgcacagcatgtgaccatcaGggcagtgcctttacccttac
                         -35                 -10            +1                   
CAGCAT TTGATT [HIPP]
[IDA]
[IEP]
[TIM]
[22]
  mlcp2 1668591 ynfK, mlc 27 cctaagtaaaaatttgacgacacgtattgaagtgcttcaccatagcctacagattatttcGgagcgcgaaaatatagggag
                           -35                 -10          +1                   
CTACAG TTGAAG [AIPP]
[TIM]
[36]
[6]
[37]
  mlcp2 1668591 ynfK, mlc 27 cctaagtaaaaatttgacgacacgtattgaagtgcttcaccatagcctacagattatttcGgagcgcgaaaatatagggag
                           -35                      -10     +1                   
GATTAT TTGAAG [AIPP]
[TIM]
[36]
[6]
[37]
  mngAp 765811 mngA, mngB 173 ctgacgccaaactctgtttgtagcgctgattcagtgggtaacgcatcgccaggtttaagcTcgccacgcgcaatttgttca
                              -35              -10          +1                   
CGCCAG TTCAGT [HIPP]
[IC]
[1]
[38]
  mutLp2 4397046 mutL, miaA, hfq, hflX, hflK, hflC 366 ctgctgggtggggcgggtgatgtgctggcgaacagtcagtctgacccctatttaagccagGcggtgctggatttacagttc
                          -35                 -10           +1                   
CCCTAT TGGCGA [HIPP]
[IDA]
[IEP]
[TIM]
[22]
  mutMp 3811175 mutM 23 taacaaaaaacctcgctccggcggggttttttgttatctgcttgcccccatattgactgcAtctgttcattcctggagatg
                           -35                -10           +1                   
CCCCAT TTTTTT [AIPP]
[TIM]
[39]
[6]
[5]
  narPp 2290422 narP 78 atgatgccaaagcgaacgacaaggttgtagttttcactacatgtccatacataaaatgggGtaacattcacgcgcctggta
                         -35               -10              +1                   
GTCCAT TTGTAG [AIPP]
[IDA]
[IEP]
[TIM]
[6]
[4]
  nfuAp2 3545458 nfuA 166 cgcaacctgaaaaatgcctttcgtcttgaattgcccgtgcaaggtcgccatatggtgattGtggatgatgtcgttaccacc
                          -35                 -10           +1                   
CGCCAT TTGAAT [AIPP]
[RS-EPT-CBR]
[TIM]
[6]
[8]
  osmFp2 null yehW, yehX, yehY, osmF       [IDA]
[IEP]
[4]
  pgpCp 2698638 tadA, pgpC 88 tttatattccattgccgctaattgccatgaattaaaaattccagttagccatgatgcggtCgattgttgccggaaaagtga
                           -35                 -10          +1                   
AGCCAT ATGAAT [AIPP] [7]
  phoPp3 1190491 phoQ, phoP 44 tttttcactttacctcccctccccgctggtttatttaatgtttacccccataaccacataAtcgcgttacactattttaat
                              -35             -10           +1                   
CCCCAT TTTATT [AIPP]
[IDA]
[IEP]
[TIM]
[6]
[4]
  pncCp 2824394 pncC 48 taatcagcttttttctgaatcctcctcgtaaaattgcaacgccaacaccatcttcctgacGaaagtgctatcttgtccggc
                          -35                 -10           +1                   
CACCAT TCGTAA [HIPP]
[TIM]
[6]
  pphAp 1923385 pphA, sdsR 178 attcagattgatgatcctaacaatcccggcgaaaaaatgagtctggcaccgtttatagaaCgagctgaaaaactctgttaa
                             -35               -10          +1                   
CACCGT GCGAAA [AIPP]
[TIM]
[TIM]
[40]
  ppiDp1 461838 ppiD 77 cttttttatttgtattcggtgactttctgcgtcttgtgggctgacaattgcccccgtttcTtgtcacaataggcctttgcg
                                  -35               -10     +1                   
CCCCGT TTGTGG [HIPP]
[TIM]
[41]
  prlCp 3645238 rsmJ, prlC 56 cgccgcgaaagcgtaacgtttctcattgaaattcactacacttaaccccatgctacacacAttatgtaaagcgcctgttga
                          -35                 -10           +1                   
CCCCAT TTGAAA [AIPP]
[IDA]
[IEP]
[RS-EPT-CBR]
[6]
[8]
[4]
  ptsHp4 2533501 ptsH, ptsI, crr 263 tcaaactttcgcccctcctggcattgattcagcctgtcggaactggtatttaaccagactAattattttgatgcgcgaaat
                        -35                    -10          +1                   
TATTTA TTGATT [HIPP]
[RS-EPT-CBR]
[TIM]
[42]
[43]
[44]
[8]
  ptsHp4 2533501 ptsH, ptsI, crr 263 tcaaactttcgcccctcctggcattgattcagcctgtcggaactggtatttaaccagactAattattttgatgcgcgaaat
                -35                         -10             +1                   
TGGTATTTA TCCTGGCATTGAT [HIPP]
[RS-EPT-CBR]
[TIM]
[42]
[43]
[44]
[8]
  ptsHp5 2533498 ptsH, ptsI, crr 266 gcttcaaactttcgcccctcctggcattgattcagcctgtcggaactggtatttaaccagActaattattttgatgcgcga
    [TIM] [45]
[44]
  raiAp 2737104 raiA 50 aaaagattcgttgacaaaaagtgacaaaattatgagattttcatcacacattttgacatcAggaacggtatgctgaattca
    [IDA]
[IEP]
[4]
  rdgBp 3096620 rdgB, hemW 61 cgggttgccaaaagccaggtggtgattgaaaaaggcgaacttggccgccacaaacaaattAaaatcattaatccgcaacaa
                          -35                 -10           +1                   
CGCCAC TTGAAA [AIPP]
[TIM]
[6]
  rfaDp3 3793865 rfaD, waaF, waaC, waaL 122 gcactattcacatgcaaaaccaacatccgccatgaaggactagctaaaacccaaactagtTtgttgcaattagcatccttg
                                -35              -10        +1                   
ACCCAA ATGAAG [TIM] [46]
  ribEp 434504 ribE, nusB, thiL, pgpA 143 ccgcggattatgcacgctgccagggcttgagaaattagccgacgccccccaatttaaattCaaagagatacgtcatgtagg
                           -35                 -10          +1                   
CCCCAA TTGAGA [AIPP]
[RS-EPT-CBR]
[TIM]
[6]
[8]
  rlmEp2 3327731 ftsH, rlmE 67 atcgtattttttgcttacgttgggattgaaaacgggtcattctaccgccatctcccatatAtcaccaaataggcgcgtaaa
                          -35                 -10           +1                   
CGCCAT TTGAAA [AIPP]
[HIPP]
[IDA]
[IEP]
[TIM]
[47]
[6]
[4]
  rnlAp 2765906 rnlA 12 tttagcaaatcaatacacttcaggggggtattattgtagagtttccccatatgtttctatGggatccaggaaatgacaatc
                          -35                -10            +1                   
CCCCAT GGGTAT [AIPP]
[IDA]
[6]
  rpmEp 4126908 rpmE 105 cacattgccgtagaagagtgcggatcagtttgcatacgctggttaatttctgtatgatttCgcgccttcgtacgaaatgat
    [HTIM]
[IDA]
[IEP]
[7]
[4]
  rpoDp3 3212688 rpoD 359 cgtggtacaaataatgctgccacccttgaaaaactgtcgatgtgggacgatatagcagatAagaatattgctgagcaaacc
                                     -35             -10    +1                   
TAGCAG TCGATG [HIPP]
[IDA]
[IEP]
[IMP]
[TIM]
[48]
[4]
  rrsAp1 4035239 rrsA, ileT, alaT, rrlA, rrfA 292 cagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccActgacacggaacaacggcaa
                                  -35                 -10   +1                   
CGCCAC CGGAAT [HIPP] [49]
  rrsAp1 4035239 rrsA, ileT, alaT, rrlA, rrfA 292 cagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccActgacacggaacaacggcaa
                         -35                   -10          +1                   
TATAAT TTGTCA [HIPP] [49]
  rrsBp1 4166367 rrsB, gltT, rrlB, rrfB 292 cagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccActgacacggaacaacggcaa
                                  -35                 -10   +1                   
CGCCAC CGGAAT [HIPP]
[TIM]
[50]
[51]
[52]
[53]
[49]
[54]
[55]
[56]
  rrsBp1 4166367 rrsB, gltT, rrlB, rrfB 292 cagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccActgacacggaacaacggcaa
                         -35                   -10          +1                   
TATAAT TTGTCA [HIPP]
[TIM]
[50]
[51]
[52]
[53]
[49]
[54]
[55]
[56]
  rrsCp1 3941516 rrsC, gltU, rrlC, rrfC 292 cagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccActgacacggaacaacggcaa
                                  -35                 -10   +1                   
CGCCAC CGGAAT [AIPP]
[HIPP]
[49]
  rrsCp1 3941516 rrsC, gltU, rrlC, rrfC 292 cagaaaattattttaaatttcctcttgtcaggccggaataactccctataatgcgccaccActgacacggaacaacggcaa
                         -35                   -10          +1                   
TATAAT TTGTCA [AIPP]
[HIPP]
[49]
  rrsDp1 3429047 rrfF, thrV, rrfD, rrlD, alaU, ileU, rrsD 285 cagaaaaaaagatcaaaaaaatacttgtgcaaaaaattgggatccctataatgcgcctccGttgagacgacaacgtgaaac
                           -35              -10             +1                   
CCCTAT GTGCAA [HIPP]
[TIM]
[53]
[49]
[57]
  rrsDp1 3429047 rrfF, thrV, rrfD, rrlD, alaU, ileU, rrsD 285 cagaaaaaaagatcaaaaaaatacttgtgcaaaaaattgggatccctataatgcgcctccGttgagacgacaacgtgaaac
                         -35                   -10          +1                   
TATAAT TTGTGC [HIPP]
[TIM]
[53]
[49]
[57]
  rrsEp 4207863 rrsE, gltV, rrlE, rrfE 284 agtcatttttctgcaatttttctattgcggcctgcggagaactccctataatgcgcctccAtcgacacggcggatgtgaat
                         -35                -10             +1                   
CCCTAT TTGCGG [HIPP] [49]
  rrsEp 4207863 rrsE, gltV, rrlE, rrfE 284 agtcatttttctgcaatttttctattgcggcctgcggagaactccctataatgcgcctccAtcgacacggcggatgtgaat
                         -35                   -10          +1                   
TATAAT TTGCGG [HIPP] [49]
  rrsGp1 2731448 rrfG, rrlG, gltW, rrsG 291 cgataaagtttttatatttttcgcttgtcaggccggaataactccctataatgcgccaccActgacacggaacaacggcaa
                                  -35                 -10   +1                   
CGCCAC CGGAAT [HIPP] [49]
  rrsGp1 2731448 rrfG, rrlG, gltW, rrsG 291 cgataaagtttttatatttttcgcttgtcaggccggaataactccctataatgcgccaccActgacacggaacaacggcaa
                         -35                   -10          +1                   
TATAAT TTGTCA [HIPP] [49]
  rrsHp1 223485 rrsH, ileV, alaV, rrlH, rrfH 286 tgaaataaaaatgcatttttccgcttgtcttcctgagccgactccctataatgcgcctccAtcgacacggcggatgtgaat
                                               -10          +1                   
TATAAT   [HIPP]
[HTIM]
[58]
[49]
  sdaAp 1896809 sdaA 123 ctatacttatctttacatctacaaaacactacttgagacaatcatcgcaatattagttaaAtcgcggtttttgattagttt
                            -35              -10            +1                   
TCGCAA ACTACT [HIPP]
[IDA]
[IEP]
[TIM]
[6]
[4]
  sltp7 4630700 slt 33 cgtaacgtggcgtaaacggcaatgactggttagcataaatctattacgcggcatgacgctGcattgatgtatttacactta
                          -35                    -10        +1                   
CGGCAT CTGGTTA [ICWHO] [3]
  topAp1 1330980 topA 68 tcgtgaacagagtcacgacaaggggttgatatccgcagagagcgagtccatatcggtaacTcgttgccagtggaaggttta
                          -35                 -10           +1                   
GTCCAT TTGATA [AIPP]
[HIPP]
[IMP]
[TIM]
[TIM]
[59]
[6]
[60]
[61]
[62]
[4]
  trmAp 4163295 trmA 25 ctcacaaataggaattcatcaagatctggacatctgatgagcaatccctacaatcgccgcGtactttaatttttcaggata
                           -35                -10           +1                   
CCCTAC TGGACA [HIPP]
[TIM]
[63]
  xerDp 3039851 recJ, dsbC, xerD 108 ttctgccgccatttcggtgtaacaggtgctggaaccgtaaaaaagacccatattcataacGtaagcttctcgattctgctg
                              -35             -10           +1                   
ACCCAT TGGAAC [HIPP]
[IDA]
[6]
  xerDp 3039851 recJ, dsbC, xerD 108 ttctgccgccatttcggtgtaacaggtgctggaaccgtaaaaaagacccatattcataacGtaagcttctcgattctgctg
                          -35                    -10        +1                   
CATATT GTGCTG [HIPP]
[IDA]
[6]
  yafDp 231064 yafD, yafE 58 gcacttgcttacataacaatatacaattgctcgttgaaagagtgagctaaaatccctataAcagtagaaccctcccgagtg
                                  -35                 -10   +1                   
CCCTAT TTGAAA [AIPP]
[IDA]
[IEP]
[TIM]
[6]
[4]
  yafUp null yafU       [IDA]
[IEP]
[4]
  ybbNp1 518490 cnoX 211 caaccagacgcaaagtgataaaccagtcgaaaatcccggcatcgccgcccgctttacgttGggaccggaagcggtggtgga
                           -35                -10           +1                   
CGCCCG TCGAAA [AIPP]
[IDA]
[IEP]
[4]
[5]
  ybeDp 662706 lipB, ybeD 64 cactggtttggttaaaaattaaacacttgaaagtgtaatttccgtccccatatactaagcAtcagtaaaaaactcccgcct
                           -35                -10           +1                   
CCCCAT TTGAAA [HIPP]
[IDA]
[IEP]
[RS-EPT-CBR]
[6]
[8]
[4]
  ybeDp 662706 lipB, ybeD 64 cactggtttggttaaaaattaaacacttgaaagtgtaatttccgtccccatatactaagcAtcagtaaaaaactcccgcct
                           -35                     -10      +1                   
TATACT TTGAAA [HIPP]
[IDA]
[IEP]
[RS-EPT-CBR]
[6]
[8]
[4]
  ybeZp 693469 lnt, ybeX, ybeY, ybeZ 91 tctcaggcctgccgttccggtgggccttgttttttctctctttatccccatctttattgcAatgcttgcgcctttttcctg
                           -35                -10           +1                   
CCCCAT TTGTTT [AIPP]
[IDA]
[IEP]
[RS-EPT-CBR]
[TIM]
[6]
[8]
[4]
  ybfEp 711939 ybfE 41 gcgcgtgggcgttggcgtgactcatcgcgctgatgtattatggcgcgctatccatccgggCagaggcctggctgattgttt
                              -35                 -10       +1                   
ATCCAT CTGATG [AIPP] [1]
  yccEp null yccE       [IDA]
[IEP]
[4]
  yceJp 1119071 yceI, yceJ 25 atcattcaatttgttatttttgtgttgcaattcattctccgacacgccattttctttctcTcgcaaattcgttttggatgc
                         -35                    -10         +1                   
CATTTT TTGCAA [AIPP]
[IDA]
[6]
  yceJp 1119071 yceI, yceJ 25 atcattcaatttgttatttttgtgttgcaattcattctccgacacgccattttctttctcTcgcaaattcgttttggatgc
                         -35                 -10            +1                   
CGCCAT TTGCAA [AIPP]
[IDA]
[6]
  ycjXp 1384069 ycjX, ycjF, tyrR 48 tcgccggtcgatgacaacacgggcagttgataatcaatggcctggcccccacattcatatCcttacgaatgattttttttc
                           -35                 -10          +1                   
CCCCAC TTGATA [AIPP]
[IDA]
[IEP]
[TIM]
[6]
[4]
  ycjYp6 1392072 mpaA, ymjC, ymjD, ycjY 219 atcccaatcgttcttctatacgacgcactatctggcttaaagctgactgcgccatgctcaGgcgggctgctgcacgagtga
    [ICWHO] [3]
  ydeOp null ydeO       [IDA]
[IEP]
[4]
  ydhQp 1746202 ydhQ 75 acaacccaataattcgtgtatcagagtttaaacagagttgtttgccaccatctcaaatctGtcgtggataaatcctccgta
                           -35                -10           +1                   
CACCAT TTTAAA [AIPP]
[IDA]
[IEP]
[TIM]
[6]
[4]
  yehRp null yehR       [IDA]
[IEP]
[4]
  yfbRp3 2408831 yfbR 31 agctgtaatcttaatttcactgccggagattgcatccggcagcgttatcccgccacaatgAcctgatgatgtcatcatacg
                             -35                   -10      +1                   
CGCCAC ATTGCAT [ICWHO] [3]
  ygbFp 2878915 cas2 62 gcttatagaggacgtgcttgccgctggagaaatacaaccgccggccccacctgaagatgcAcagcctgttgccattccgct
                         -35                 -10            +1                   
CCCCAC TGGAGA [AIPP]
[TIM]
[6]
  yhdNp 3439546 zntR, yhdN 37 acgtaaaaaaacccgccccggcgggtttttttatacccgtagtatccccacttatctacaAtagctgtactctttttgttc
                              -35             -10           +1                   
CCCCAC TTTATA [AIPP]
[IDA]
[IEP]
[TIM]
[6]
[4]
  yiaAp null yiaA       [IDA]
[IEP]
[4]
  yibAp null yibA       [IDA]
[IEP]
[4]
  yjaZp 4189753 yjaZ 33 agatgactaatatcctgaaactgactgaactaattgagtcaaactcggcaaggattcgatActattcctgtgtaactttct
                             -35              -10           +1                   
CGGCAA ACTAAT [HIPP]
[TIM]
[TIM]
[64]
  yjhBp2 4504020 yjhB, yjhC 38 actggcgtatttgaagacaatataattatttctggatattgttgaggctccctaatatttActttaagggctatattagaa
                                -35               -10       +1                   
CCCTAA CTGGATA [ICWHO] [3]
  yjhIp null yjhG, yjhH, yjhI       [IDA]
[IEP]
[4]
  yjiTp null yjiT       [IDA]
[IEP]
[4]
  ypjMp null yfjV       [IDA]
[IEP]
[4]
  yrdAp null yrdA       [IDA]
[IEP]
[4]
  yrfGp null yrfG, hslR       [IDA]
[IEP]
[4]
Evidence: [AIPP] Automated inference of promoter position
[ICWHO] Inferred computationally without human oversight
[IDA] Inferred from direct assay
[IEP] Inferred from expression pattern
[TIM] Transcription initiation mapping
[HTIM] High-throughput transcription initiation mapping
[RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates
[HIPP] Human inference of promoter position
[IC] Inferred by curator
[IMP] Inferred from mutant phenotype


Reference(s)    

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 [63] Gustafsson C., Lindstrom PH., Hagervall TG., Esberg KB., Bjork GR., 1991, The trmA promoter has regulatory features and sequence elements in common with the rRNA P1 promoter family of Escherichia coli., J Bacteriol 173(5):1757-64

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RegulonDB