RegulonDB RegulonDB 10.8: Sigmulon Form
   

Sigma70 Sigmulon in Escherichia coli K-12 genome




Sigma Factor      
Name: Sigma70     
Synonyms: RpoD
Gene name: rpoD
Sigmulon regulators:
Sigmulon Genes:


Transcribed promoters    
  Promoter Name TSS Position Transcribed Gene(s) Distance from TSS
to gene
Promoter Sequence Box
(-10)
Box
(-35)
Evidence Code(s) Reference(s)
  accAp 208411 accA 210 gcccgggaaaaatatgctcgcgggcttgctatctcgctgacggacaggcaaattgatgacCagcttttaaaccgactccgt
                          -35                    -10        +1                   
CAAATT TTGCTA [TIM] [1]
[2]
  accBp 3405140 accB, accC 296 tgaaggttatttacatgttagctgttgattatcttccctgataagaccagtatttagctgCcaattgctacgaaatcgtta
                         -35                    -10         +1                   
CAGTAT TTGATT [HIPP]
[TIM]
[3]
  accDp 2434015 accD 89 actccgcggttcgaccacttttttatccaaagtttcgggctgttatgttttaatgtgcaaCattcatggtctgttgggggc
                    -35                     -10             +1                   
TATGTT TTTTTA [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
[1]
[4]
  aceBp 4215402 aceB, aceA, aceK 76 tatttttaattaaaatggaaattgtttttgattttgcattttaaatgagtagtcttagttGtgctgaacgaaaagagcaca
                            -35                   -10       +1                   
TAGTCT TTGATT [TIM] [5]
  aceEp 122969 aceE, aceF 48 aaagcgcggcaactaaacgtagaacctgtcttattgagctttccggcgagagttcaatggGacaggttccagaaaactcaa
                          -35              -10              +1                   
CCGGCGAGAGT CTGTCT [CV(RS-EPT-CBR)]
[CV(TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM]
[6]
[4]
[7]
  aceEp 122969 aceE, aceF 48 aaagcgcggcaactaaacgtagaacctgtcttattgagctttccggcgagagttcaatggGacaggttccagaaaactcaa
                          -35                   -10         +1                   
GAGAGT CTGTCT [CV(RS-EPT-CBR)]
[CV(TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM]
[6]
[4]
[7]
  acnAp1 1335424 ymiC, acnA 148 aatgttccgtcgttattccagacgactggcaactaacatcgcagcagcaagcctttatagAactgtttgctgaagatgatc
                          -35                    -10        +1                   
AAGCCT CTGGCA [HIPP]
[TIM]
[8]
  acnAp1 1335424 ymiC, acnA 148 aatgttccgtcgttattccagacgactggcaactaacatcgcagcagcaagcctttatagAactgtttgctgaagatgatc
                          -35               -10             +1                   
GCAGCAAGCCT CTGGCA [HIPP]
[TIM]
[8]
  acnAp2 1335781 acnA 50 tcttttatcaatttgggttgttatcaaatcgttacgcgatgtttgtgttatctttaatatTcaccctgaagagaatcaggg
                                -35                    -10  +1                   
TAATAT TTACGC [HIPP]
[TIM]
[8]
[9]
  acnBp 131519 acnB 96 tttatgttgcttttttgtaaacagattaacacctcgtcaaaatcctgctattctgcccgtTgcggtactgggcatttaccc
                          -35                    -10        +1                   
TATTCT TTAACA [HIPP]
[TIM]
[8]
[9]
  acpPp 1151575 acpP, fabF 40 atcgtggtaagacctgccgggatttagttgcaaatttttcaacattttatacactacgaaAaccatcgcgaaagcgagttt
    [HIPP]
[TIM]
[10]
  acrAp 485698 acrB, acrA 79 gttcgtgaatttacaggcgttagatttacatacatttgtgaatgtatgtaccatagcacgAcgataatataaacgcagcaa
                         -35                     -10        +1                   
TACCAT TTTACA [HIPP]
[TIM]
[11]
[12]
[13]
[14]
  acrDp 2587475 acrD 120 aaagtcagttaatgtaatgcctcctactgaccaaagaatacttgcacttaaggttcagtaTaaaagggcatgataatttac
                           -35                   -10        +1                   
TAAGGT CTGACC [AIPP] [15]
  acrEp 3413702 acrE, acrF 162 ttacgaggttttaattctgcctctttcaacccgcgtcaaaataaaacagtagaatattaaTctttttttgtgtttatgtgc
                        -35                       -10       +1                   
TAGAAT TTTCAA [AIPP] [15]
  acrRp 485699 acrR 62 gatttcaaattggtcaatggtcaaaagttaataaacccattgctgcgtttatattatcgtCgtgctatggtacatacattc
                            -35                     -10     +1                   
TATTAT TTAATA [AIPP] [15]
  acrZp 794751 acrZ 22 cgcaaagctgaccgcacaaaaggggagtgcttttctgtgcttagcggttagaatagtctcAtgactatatctggagttgac
                                                 -10        +1                   
TAGAAT   [TIM] [16]
  acsp1 4287595 actP, yjcH, acs 224 aataaccacactgtgaatgttgtctttaatcaattgtaagtgcatgtaaaataccactttAgagttagtcagtatcttcct
                    -35                        -10          +1                   
TAAAAT TTGTCT [AIPP] [17]
[18]
  acsp2 4287391 actP, yjcH, acs 20 atactaaacaaaactgccaatacccctacatttaacgcttatgccacatattattaacatCctacaaggagaacaaaagca
                               -35              -10         +1                   
ATATTATT TTTAACGCT [AIPP]
[HTIM]
[19]
[18]
[6]
  adap 2310427 alkB, ada 22 aaaaattaaagcgcaagattgttggtttttgcgtgatggtgaccgggcagcctaaaggctAtccttaaccagggagctgat
                             -35                -10         +1                   
CAGCCTAAAGG TTGCGT [TIM] [20]
  adap 2310427 alkB, ada 22 aaaaattaaagcgcaagattgttggtttttgcgtgatggtgaccgggcagcctaaaggctAtccttaaccagggagctgat
                             -35                     -10    +1                   
TAAAGG TTGCGT [TIM] [20]
  addp6 1702202 add 31 aacgtaaaaaatcgttgcgcaatcgtggatttttaccctgctttgtttttataatggtgcGcacttttatatccagaaaaa
                         -35                      -10       +1                   
TATAAT GTGGAT [ICWHO] [15]
  adep 3843910 adeD 54 ttcagtgataattatcacatttcaattgcacattaatggatattctttaataatctcgcgAcgtttctttatgataaataa
                          -35                    -10        +1                   
AATAAT TTGCAC [HIPP]
[TIM]
[21]
  adhEp1 1298413 adhE 292 ttgttatctagttgtgcaaaacatgctaatgtagccaccaaatcatactacaatttattaActgttagctataatggcgaa
                         -35                -10             +1                   
CATACTACAAT GCTAAT [IMP]
[TIM]
[22]
[23]
  adhEp1 1298413 adhE 292 ttgttatctagttgtgcaaaacatgctaatgtagccaccaaatcatactacaatttattaActgttagctataatggcgaa
                       -35                       -10        +1                   
TACAAT ATGCTA [IMP]
[TIM]
[22]
[23]
  adiAp 4340556 adiA 35 ttcaaaaatgtttgtttttcacgcgctttacagcccgaaaaggccggaagatacttgcccGcaacgaagattccttcataa
                           -35                    -10       +1                   
GATACT TTTACA [HIPP]
[IMP]
[TIM]
[24]
  agaRp 3278703 agaR 38 agcttgcgtcaatgggcaaggtgggcttgcatttgcttaatagaaaggcgttaataggcaAaacgaaatgaaacgaaagtt
                                 -35                   -10  +1                   
TAGGCA TTGCTT [HIPP]
[TIM]
[25]
  agaSp 3281889 agaS, kbaY, agaB, agaC, agaD, agaI 87 tcgttttatttcttttttctccattgaactttcagtttcttttctatagattttaatcaaCgaaagacatcaccaagtgaa
                        -35                  -10            +1                   
TATAGA TTGAAC [HIPP]
[TIM]
[25]
  ahpCp 638921 ahpC, ahpF 24 atcgatttgataatggaaacgcattagccgaatcggcaaaaattggttaccttacatctcAtcgaaaacacggaggaagta
                        -35                     -10         +1                   
TACCTT TTAGCC [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
[4]
[26]
  ahpCp2 638693 ahpC, ahpF 252 taggtaagagcttagatcaggtgattgccctttgtttatgagggtgttgtaatccatgtcGttgttgcatttgtaagggca
                         -35                       -10      +1                   
AATCCA TTGCCC [TIM] [27]
  aidBp 4414247 aidB 28 gataagaatgttttagcaatctctttctgtcatgaatccatggcagtgaccatactaatgGtgactgccattgatggaggg
                        -35                        -10      +1                   
CATACT TTTCTG [TIM] [28]
[29]
[30]
[31]
[32]
  aidBp 4414247 aidB 28 gataagaatgttttagcaatctctttctgtcatgaatccatggcagtgaccatactaatgGtgactgccattgatggaggg
                             -35              -10           +1                   
GTGACCATACT GTCATG [TIM] [28]
[29]
[30]
[31]
[32]
  alaCp 2498399 alaC 104 agataaatttcctgtttttaaagcagagttcctcatttaacgtcattaataaaatgttctAaaacgctggacagacagaaa
                             -35                  -10       +1                   
TAAAAT TTCCTC [AIPP] [15]
  alaEp 2799084 alaE 80 aaactgactaaataaaaatttttcactaattgattagtcatagccagcgatatacgctatGcgaaaatgcagatggcaatg
                               -35                   -10    +1                   
TACGCT TGATT [TIM] [33]
  alaWp 2518253 alaX, alaW 22 actacacgttgcaatttgccgttgacacattcgggcggaattcatatgatgccgcccgtcAactcgacaagctttacgtga
                      -35                    -10            +1                   
TATGAT TTGACA [HIPP]  
  aldAp 1488190 aldA 42 cccttcacagaattgtcctttcacgattccgtctctctgatgattgatgttaattaacaaTgtattcaccgaaaacaaaca
                           -35                     -10      +1                   
TAATTA TTCCGT [HIPP]
[TIM]
[34]
[35]
  alkAp 2147559 alkA 19 tcgcgacaaccggaatatgaaagcaaagcgcagcgtctgaataacgtttatgctgaaagcGgatgaataaggagatgcgat
                           -35              -10             +1                   
ACGTTTATGCT AGCGCA [CV(RPF)]
[CV(RPF/RS-EPT-CBR)]
[CV(RS-EPT-CBR)]
[RPF]
[RS-EPT-CBR]
[36]
[37]
[4]
  alkAp 2147559 alkA 19 tcgcgacaaccggaatatgaaagcaaagcgcagcgtctgaataacgtttatgctgaaagcGgatgaataaggagatgcgat
                      -35                        -10        +1                   
TATGCT AGCAAA [CV(RPF)]
[CV(RPF/RS-EPT-CBR)]
[CV(RS-EPT-CBR)]
[RPF]
[RS-EPT-CBR]
[36]
[37]
[4]
  alkBp 2309445 alkB 104 aaagcggtacgggccgttgccagcgcctgtgccgccaacaagctggctatcataatacccTgtcatcgggtggtccgtggt
                           -35                  -10         +1                   
TATCAT CTGTGC [HIPP] [38]
  allBp 539041 allB 106 cgcgtgtttcatggtttgtcggcgtcatcgtcgcctttgcggcctacgccttattaaagaAacgtacaacagcagaaaaaa
                                                    -10     +1                   
TATTAA   [RE]
[TIM]
[39]
  allBp2 538986 allB 161 gtggccgttattttatctcttggcggtaagtttattcactttatggaaccgttatcgcgtGtttcatggtttgtcggcgtc
                                                  -10       +1                   
CGTTAT   [RE]
[TIM]
[39]
  allBp3 538944 allB 203 tacgataacggttttaacctcactgcgttttcagtaactctggtggccgttattttatctCttggcggtaagtttattcac
                            -35                    -10      +1                   
TATTTT TTTTCA [RE]
[TIM]
[39]
  allDp 546411 allE, allC, allD 48 aataaattctaactatatttttttgcctgtctggatcacataatccagatattttccctgTatgttaattgcagtcatgct
                       -35                        -10       +1                   
TATTTT TTGCCT [AIPP] [15]
  alsRp1 4313132 alsE, alsC, alsA, alsB, alsR 141 catctatcatctaaaaaaccagaaaaacaaataacatcatgtttttaaactaattaaatgAaataaaattttaagccactc
                     -35                      -10           +1                   
TAAACT AGAAAA [TIM] [40]
  alsRp2 4313137 alsE, alsC, alsA, alsB, alsR 146 agcaacatctatcatctaaaaaaccagaaaaacaaataacatcatgtttttaaactaattAaatgaaataaaattttaagc
                          -35                      -10      +1                   
TAAACT AGAAAA [HIPP]
[TIM]
[40]
  amiAp 2552241 amiA, hemF 111 gtgaacggtcgaattagccaatatctgacgaaaatcggttgaaaaagtggcataatggggAgttgtcaactattgaaatga
                         -35                       -10      +1                   
CATAAT CTGACG [HIPP]
[TIM]
[41]
  ampCp 4379003 ampC 59 tacggtctggctgctatcctgacagttgtcacgctgattggtgtcgttacaatctaacgcAtcgccaatgtaaatccggcc
                          -35                   -10         +1                   
TACAAT TTGTCA [IMP]
[RS-EPT-CBR]
[42]
[43]
[4]
  amyAp 2006115 amyA 41 gctccgcaggataacctcttttgaatctgaatgagtcgatggctcgcgaataatccgattAcggctacgcttctaatgttc
                           -35                   -10        +1                   
AATAAT CTGAAT [HIPP] [44]
  ansBp2 3100751 ansB 23 tcacgttgtaaattgtttaacgtcaaatttcccatacagagctaagggataatgcgtagcGttcacgtaactggaggaatg
                      -35                       -10         +1                   
GATAAT GTCAAA [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[45]
[4]
  appCp 1037710 appC, appB, appX, appA 30 ggcgaatacctctggtcgtagagtttcaggataaagagggagatctaccattatcgggttAtttttctctcttcgcctaca
                        -35              -10                +1                   
AGATCTACCAT TTTCAG [HIPP] [46]
[47]
[48]
  appCp 1037710 appC, appB, appX, appA 30 ggcgaatacctctggtcgtagagtttcaggataaagagggagatctaccattatcgggttAtttttctctcttcgcctaca
                        -35                   -10           +1                   
TACCAT TTTCAG [HIPP] [46]
[47]
[48]
  appYp 583567 appY 114 aataaaaaacaacatacatataataatttaatcttaaatgaaatttattaaaatttgcaaActataattttgtgtataaaa
                           -35                   -10        +1                   
TAAAAT TTTAAT [AIPP] [15]
  appYp3 583580 appY 101 atacatataataatttaatcttaaatgaaatttattaaaatttgcaaactataattttgtGtataaaaatataaatgcaca
                                                  -10       +1                   
TATAAT   [TIM] [49]
  aptp 491310 apt 102 aaagcactgaagcacaacaatcgcagttgcaattattgcgtacagccagtacattctggcGttttcgagcacaggcgcagg
                           -35                    -10       +1                   
TACATT TTGCAA [HIPP]
[TIM]
[50]
  araBp 70075 araD, araA, araB 27 ccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatAcccgtttttttggatggagt
                       -35                     -10          +1                   
TACTGT CTGACG [TIM] [51]
[52]
[53]
  araCp 70223 araC 164 tgacgccgtgcaaataatcaatgtggacttttctgccgtgattatagacacttttgttacGcgtttttgtcatggctttgg
                        -35                    -10          +1                   
GACACT TGGACT [HIPP]
[TIM]
[54]
[55]
  araEp 2982208 ygeA, araE 26 catatttatgctgtttccgacctgacacctgcgtgagttgttcacgtattttttcactatGtcttactctctgctggcagg
                      -35                      -10          +1                   
TATTTT CTGACA [TIM] [56]
  araFp 1986238 araH, araG, araF 110 aattctgcgatgtgatattgctctcctatggagaattaatttctcgctaaaactatgtcaAcacagtcacttatcttttag
                       -35                 -10              +1                   
CTCGCTAAAAC CTCCTA [TIM] [57]
[31]
  araFp 1986238 araH, araG, araF 110 aattctgcgatgtgatattgctctcctatggagaattaatttctcgctaaaactatgtcaAcacagtcacttatcttttag
                             -35                      -10   +1                   
TATGTC TGGAGA [TIM] [57]
[31]
  araJp 412529 araJ 48 gaatacagaggggcgaattatctcttggccttgctggtcgttatcctgcaagctatcactTtattggctacggtgattggt
                         -35                      -10       +1                   
AAGCTA TTGGCC [TIM] [57]
  arcAp1 4640508 arcA 202 ttgggtgtccggcccctcttagcctgttatgttgctgttaaaatggttaggatgacagccGtttttgacactgtcgggtcc
                           -35                  -10         +1                   
TAGGAT TTATGT [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
[58]
[4]
  arcAp2 4640512 arcA 206 tttattgggtgtccggcccctcttagcctgttatgttgctgttaaaatggttaggatgacAgccgtttttgacactgtcgg
                               -35                  -10     +1                   
TAGGAT TTATGT [HIPP]
[TIM]
[58]
  arcAp3 4640535 arcA 229 gatatatgtcaacgaagcgtagttttattgggtgtccggcccctcttagcctgttatgttGctgttaaaatggttaggatg
                            -35                        -10  +1                   
TATGTT TTGGGT [HIPP]
[TIM]
[58]
  arcAp4 4640599 arcA 293 tgacgaaagctagcatttagatacgatgatttcatcaaactgttaacgtgctacaattgaActtgatatatgtcaacgaag
                          -35                       -10     +1                   
TACAAT ATGATT [HIPP]
[TIM]
[58]
  arcAp5 4640681 arcA 375 tttataaaaaataaatctcgacaattggattcaccacgtttattagttgtatgatgcaacTagttggattattaaaataat
                         -35                      -10       +1                   
TATGAT TTGGAT [HIPP]
[TIM]
[58]
  arcAp6 4640688 arcA 382 ggataattttataaaaaataaatctcgacaattggattcaccacgtttattagttgtatgAtgcaactagttggattatta
                         -35                    -10         +1                   
TATTAG TCGACA [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
[58]
[4]
  arcAp7 4640801 arcA 495 taacgtaagtcgcagaaaaagccctttacttagcttaaaaaaggctaaactatttcctgaCtgtactaacggttgagttgt
                         -35                       -10      +1                   
TATTTC TTTACT [HIPP]
[TIM]
[58]
  arfAp3 3438673 arfA 24 gggcgagtggcgttaagagtggttgttgattttttgcactggcaggattacactcgcgccGttaaataaccaactggagtt
                          -35                    -10        +1                   
TACACT TTGATT [ICWHO]
[TIM]
[59]
[15]
  argAp 2949156 argA 86 gtcatctaataaacggtaaacattctttttatattcacggcattactgataaaaaagtcgCtctcgcataaaatttacact
                            -35                   -10       +1                   
TAAAAA TTTATA [AIPP] [15]
  argCp 4154885 argC, argB, argH 116 aatggcggtaatttgtttttcattgttgacacacctctggtcatgatagtatcaatattcAtgcagtatttatgaataaaa
                          -35                  -10          +1                   
TAGTAT TTGACA [TIM] [60]
  argDp 3490221 argD 41 tttcctgcatcgctgatttctgattgccatttagtgattttttatgcatattttgtggttAtaatttcacatttgtttatg
                        -35                      -10        +1                   
TATTTT TTGCCA [RS-EPT-CBR]
[TAS]
[61]
[4]
  argEp1 4154897 argE 50 aaaacattcaccttacggctggtgggttttattacgctcaacgttagtgtatttttattcAtaaatactgcatgaatattg
                            -35                   -10       +1                   
TATTTT TTTATT [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
[62]
[60]
[4]
  argFp 290340 argF 35 gtaagaaagaattgtgaaatggggttgcaaatgaataattacacatataaagtgaattttAattcaataagtggcgttcgc
                         -35                  -10           +1                   
TATAAA TTGCAA [CV(RPF)]
[CV(RPF/RS-EPT-CBR)]
[CV(RPF/TIM)]
[CV(RS-EPT-CBR)]
[CV(TIM)]
[RPF]
[RS-EPT-CBR]
[TIM]
[63]
[64]
[4]
  argGp 3318562 argG 75 tttacaaaaaacacactaaactcttcctgtctccgataaaagatgattaaatgaaaactcAtttattttgcataaaaattc
                           -35                  -10         +1                   
TAAATG CTGTCT [AIPP] [65]
  argIp 4478344 argI 33 gtgacaaagatttatgctttagacttgcaaatgaataatcatccatataaattgaattttAattcattgaggcgttagcca
                         -35                  -10           +1                   
TATAAA TTGCAA [TIM] [64]
  argOp 3068836 argO 28 ctgattgccaattaatattatcaatttccgctaataacaatcccgcgatatagtctctgcAtcagatacttaattcggaat
                         -35                     -10        +1                   
TATAGT TTTCCG [CV(RPF)]
[CV(RPF/TIM)]
[CV(TIM)]
[HIPP]
[HTIM]
[RPF]
[TIM]
[66]
[9]
  argRp1 3384677 argR 26 ttcagccttcttcagggctgactgtttgcataaaaattcatctgtatgcacaataatgttGtatcaaccaccatatcgggt
                          -35                       -10     +1                   
AATAAT TTGCAT [AIPP]
[TIM]
[67]
  argSp 1960001 argS 61 aaacggcaatacgccacgcgcacgttgctgacgaaaacagccatttgcagtatactcccgCcctaatttctttaactggtg
                         -35                       -10      +1                   
TATACT TTGCTG [ICWHO]
[TIM]
[68]
[15]
  argUp 564703 argU 20 cagcaaccagatcaaaagccattgactcagcaagggttgaccgtataattcacgcgattaCaccgcattgcggtatcaacg
                      -35                   -10             +1                   
TATAAT TTGACT [HIPP]  
  argWp 2466308 argW 1 agcaatcgagcggcagcgtacttaccccgcactccattagcgggtatactcatgccgcatTgtcctcttagttaaatggat
                      -35                    -10            +1                   
TATACT TTACCC [HIPP]  
  argXp 3982364 argX, hisR, leuT, proM 11 gcaatttatttaaaaagggactagacagaggggtgggaagtccgtattatccacccccgcAacggcgctaagcgcccgtag
                      -35                    -10            +1                   
TATTAT TAGACA [CV(RPF)]
[CV(RPF/TIM)]
[CV(TIM)]
[HIPP]
[IMP]
[RPF]
[TIM]
[69]
  aroDp 1774571 aroD 115 attgcagcaggcgcaacaagctggttgcaaaacgattgatggatacggcatgttgttgtgGcaaggggctgaacagttcac
                         -35                       -10      +1                   
TGTTGT TTGCAA [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[70]
[4]
  aroFp 2741201 tyrA, aroF 51 gtaaataaaaatgtacgaaatatggattgaaaactttactttatgtgttatcgttacgtcAtcctcgctgaggatcaacta
                           -35                   -10        +1                   
TATCGT TTGAAA [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
[71]
[4]
  aroGp 785591 aroG 42 taatccgttcatagtgtaaaaccccgtttacacattctgacggaagatatagattggaagTattgcattcactaagataag
                           -35                    -10       +1                   
TAGATT TTTACA [CV(RPF)]
[CV(RPF/RS-EPT-CBR)]
[CV(RPF/TIM)]
[CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RPF]
[RS-EPT-CBR]
[TIM]
[72]
[4]
[73]
  aroHp1 1788318 aroH 117 cttagtcgccgaatgtactagagaactagtgcattagcttatttttttgttatcatgctaAccacccggcgaggtgtgaca
                             -35                   -10      +1                   
TATCAT GTGCAT [HIPP]
[TIM]
[74]
  aroHp2 1788384 aroH 51 cggcgaggtgtgacacacctcgcacttgaaatcagcagcgattggtttatcgtgatgcgcAtcacttcccggcagtcctgc
                          -35                   -10         +1                   
TATCGT TTGAAA [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[74]
[4]
  aroKp1 3519380 trpS, gph, rpe, dam, damX, aroB, aroK 316 ttacgctgaacgtgtttcatctatttgacgcgcgcaggtatttagcatacaaggagtaccGatttgagagttggtgctctt
                         -35                  -10           +1                   
CATACA TTGACG [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
[75]
[4]
  aroKp2 3519167 trpS, gph, rpe, dam, damX, aroB, aroK 103 cagagggatgggtgatttattcagttgccaaacccgctggagtattgagataattttcagTctgactctcgcaatatctta
                         -35                       -10      +1                   
TAATTT TTGCCA [HIPP]
[TIM]
[75]
  aroLp 406280 aroL, yaiA, aroM 125 taaatgtaatttattatttacacttcattcttgaatatttattggtatagtaaggggtgtAttgagattttcactttaagt
                        -35                   -10           +1                   
TATAGT TTCATT [TIM] [76]
[77]
  aroMp 407400 aroM 28 tgtcatttgtagcacaagtaagtgtcagcagtggtgcttcacacttgcccggtaattaacGacgaaagaaaagtaaggtgg
                         -35                       -10      +1                   
GGTAAT TCAGCA [RE]
[TIM]
[39]
  aroPp1 121671 aroP 120 ttcaaccatgcataaagcgggtgcattcgctgccgcataccattattcttgatctgacggAagtctttttgtaacaattca
                     -35                    -10             +1                   
TATTCT GTGCAT [HIPP]
[TIM]
[78]
[79]
  aroPp2 121650 aroP 99 tgcattcgctgccgcataccattattcttgatctgacggaagtctttttgtaacaattcaAacttctttgatgtaaacaaa
                            -35                     -10     +1                   
AACAAT TTGATC [HIPP]
[TIM]
[79]
  arrSp 3658054 arrS 0 caagaataagttatcaataaccagtttgtgatctctgaagaatattactaaagttaaaatGtaatccgatttaaatatcga
                          -35               -10             +1                   
ATTACTAAAGT TTGTGA [HIPP] [80]
  arrSp 3658054 arrS 0 caagaataagttatcaataaccagtttgtgatctctgaagaatattactaaagttaaaatGtaatccgatttaaatatcga
                               -35                     -10  +1                   
TAAAAT ATCTCT [HIPP] [80]
  arsRp 3648512 arsR, arsB, arsC 16 cattcgttaagtcatatatgtttttgacttatccgcttcgaagagagacactacctgcaaCaatcaggagcgcaatatgtc
                        -35                    -10          +1                   
GACACT TTGACT [HIPP]
[TIM]
[81]
[82]
  artJp 900626 artJ 51 catttaaattatttaatcatgtttattgcatataaattcacttgatggcattgttatcccAtgccgcagacacggccaaaa
                          -35                    -10        +1                   
CATTGT TTGCAT [CV(RPF)]
[CV(RPF/RS-EPT-CBR)]
[CV(RPF/TIM)]
[CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[HTIM]
[RPF]
[RS-EPT-CBR]
[TIM]
[83]
[31]
[4]
[84]
  artPp 903769 artM, artQ, artI, artP 35 ttttaacttttaaagcagaaatattgcataattattctgtcaaaggtactatcttcgaccTcaatagctatcagactgcca
                        -35                    -10          +1                   
TACTAT TTGCAT [HIPP]
[TIM]
[83]
[84]
  ascFp 2839429 ascF, ascB 95 ataaaaaatgaacaattcactctcttgcttatttagtgacaactattcatgattttgtgaAaccggtttcttaattccgtt
                         -35                    -10         +1                   
CATGAT TTGCTT [AIPP]
[TIM]
[85]
[86]
  asnAp 3927129 asnA 26 gagttaggctttttattgaatgattattgcatgtgtgtcggtttttgttgcttaatcataAgcaacaggacgcaggagtat
                           -35                        -10   +1                   
AATCAT TTGCAT [HIPP]
[TIM]
[87]
  asnCp 3927031 mnmG, mioC, asnC 28 tcattcaataaaaagcctaactcacttttgattcattaaaaaagaaggctaaaatagaatGaatcatcaatccgcataaga
                            -35                   -10       +1                   
TAAAAT TTGATT [TIM] [87]
  asnTp 2044541 asnT 8 aatgacttatgaaatttagtgttgacagacaaggtaccgctaagtaatattcgccccgttCacacgattcctctgtagttc
                      -35                       -10         +1                   
TATTCG TTGACA [HIPP]  
  asnUp 2059845 asnU 6 ttggggaatttaaaaatcgggtttgacaaaagatttttcgccgttaagatgtgcctcaacAacgattcctctgtagttcag
                       -35                   -10            +1                   
TAAGAT TTGACA [HIPP]  
  asnVp 2062252 asnV 8 caaaaaaatgcatttcaccctttgacatcaccatgcactgccattaatatgcgccccgttCacacgattcctctgtagttc
                      -35                    -10            +1                   
TAATAT TTGACA [HIPP]  
  aspAp 4368432 dcuA, aspA 105 accgacacttaaagtgatccagattacggtagaaatcctcaagcagcatatgatctcgggTattcggtcgatgcaggggat
                        -35                      -10        +1                   
TATGAT TTACGG [TIM] [88]
  aspVp 236913 aspV 18 ttcaaaagatgagaaaaaccgttgacgaaggtcgaggcaatccgtaatattcgcctcgttCccaacggaacacaacgcgga
                      -35                    -10            +1                   
TAATAT TTGACG [HIPP]  
  asrp 1671327 asr 49 gttacacgctgaaaccaaccactcacggaagtctgccattcccagggatatagttatttcAacggccccgcagtggggtta
                                 -35              -10       +1                   
ATAGTTATTTC CTGCCA [IMP]
[TIM]
[89]
[90]
  asrp 1671327 asr 49 gttacacgctgaaaccaaccactcacggaagtctgccattcccagggatatagttatttcAacggccccgcagtggggtta
                      -35                        -10        +1                   
TATAGT CTCACG [IMP]
[TIM]
[89]
[90]
  astCp1 1832013 astE, astB, astD, astA, astC 31 ggctggcacgaaccctgcaatctacatttacagcgcaaacattacttattattaacatatAaataacgaattatttactgt
                      -35                      -10          +1                   
TATTAT CTACAT [HIPP] [91]
  atpIp 3922525 atpC, atpD, atpG, atpA, atpH, atpF, atpE, atpB, atpI 85 ttattcaccttttggctacttattgtttgaaatcacgggggcgcaccgtataatttgaccGctttttgatgcttgactcta
                           -35                   -10        +1                   
TATAAT TTGAAA [TIM] [92]
[93]
  azoRp 1482904 azoR 44 gaacataggcttcgatttattgcgctatctctgtggcaggattgtgaataaagtgtcaacAagcaacggggcatcgcccat
                           -35                   -10        +1                   
TAAAGT ATCTCT [HIPP]
[TIM]
[94]
  azuCp 1988001 azuC 42 tttatgtgatttgtatcacataaagattgatttttgtgatggttgtcatattataagcgcAaagacaataacacctgtata
                           -35                   -10        +1                   
TATTAT TTGATT [TIM] [95]
  bcpp 2600437 bcp 41 attgagcaagcgttcaaagccctatgtacagaactcaatgcacaaggcagtattaacgtcGtcaattattcccaacatgat
                         -35                    -10         +1                   
CAGTAT TGTACA [HIPP]
[TIM]
[96]
  bcsBp 3692673 bcsZ, bcsB 66 agggcatattccgtgtgctgacttctctggtttcctgggttgtatcgtttattccgcgccGcccggagcggagcgaaacgg
                       -35                        -10       +1                   
TATTCC TTCTCT [AIPP] [15]
  bcsEp2 3696443 bcsE, bcsF, bcsG 15 gataagttttaatttcaatggtaggtttatttcttagctttcgctagtaaactgataatcAgacaaaatggtgacatgagg
                          -35                   -10         +1                   
TAAACT TTTATT [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[4]
[97]
  bdcAp 4474064 bdcA 11 ttacaaaacctgttgacagaaagttaaaacagttttgtaatgcatgttacataataaatcAaggagtccttatgggcgctt
                        -35                       -10       +1                   
CATAAT TTAAAA [AIPP] [15]
  betIp 329361 betA, betB, betI 27 cgtaacaattaagacacattttatattgaacgtccaatcaataaccgctttaatagataaAcaccgctgatgaatggagtg
                          -35                      -10      +1                   
TAATAG TTGAAC [HIPP]
[TIM]
[98]
  betTp 329421 betT 42 tttatctattaaagcggttattgattggacgttcaatataaaatgtgtcttaattgttacGaatttgattttaaatagtaa
                         -35                        -10     +1                   
AATTGT TTGGAC [HIPP]
[TIM]
[98]
  bglXp 2222120 bglX 131 cactccttgtggtggcgaaaaaatatcacaaactagaatagcgccttgtataacaattcaGcgagtgaatattttgaaaat
                         -35                     -10        +1                   
TATAAC ATCACA [HIPP] [99]
  bhsAp9 1169019 bhsA 54 attaatgattgttataaaaaatatcttgtatgtgatccagatcacatctatcatttagttAtcgatcgttaagtaattgct
                          -35                    -10        +1                   
TATCAT TTGTAT [ICWHO]
[TIM]
[15]
[100]
  bioAp 809292 bioA 35 gtgagccatggggcttctccaaaacgtgttttttgttgttaattcggtgtagacttgtaaAcctaaatcttttcaatttgg
                             -35                  -10       +1                   
TAGACT TTTTTT [HIPP] [101]
  bioBp 809302 bioB, bioF, bioC, bioD 42 gatcgtccgttgtcataatcgacttgtaaaccaaattgaaaagatttaggtttacaagtcTacaccgaattaacaacaaaa
                        -35                    -10          +1                   
TAGGTT TTGTAA [HIPP] [101]
  bluFp 1215506 bluF 31 aaacggttatgttttggtattaaaagaaagacacaagaagatatgtctgttaccgtcttaCtctcgcctcacccattaccc
                            -35                    -10      +1                   
TACCGT AAGACA [TIM] [102]
  bluRp 1214113 bluR 54 tcatccaatttagctgaaatcttatttatactttgtacaattttagcgtatattgtacaaAgtattattgggtcgtgtaca
                         -35                     -10        +1                   
TATATT TTTATA [CV(RS-EPT-CBR)]
[CV(TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM]
[9]
[4]
[102]
  bolAp1 454434 bolA 38 aacctaaatatttgttgttaagctgcaatggaaacggtaaaagcggctagtatttaaaggGatggatgacatctcagcgtt
                       -35                 -10              +1                   
GCGGCTAGTAT CTGCAA [AIPP]
[CV(RPF)]
[CV(RPF/RS-EPT-CBR)]
[CV(RPF/TIM)]
[CV(RS-EPT-CBR)]
[CV(TIM)]
[RPF]
[RS-EPT-CBR]
[TIM]
[103]
[104]
[105]
[106]
[4]
[107]
  bolAp1 454434 bolA 38 aacctaaatatttgttgttaagctgcaatggaaacggtaaaagcggctagtatttaaaggGatggatgacatctcagcgtt
                       -35                      -10         +1                   
TAGTAT CTGCAA [AIPP]
[CV(RPF)]
[CV(RPF/RS-EPT-CBR)]
[CV(RPF/TIM)]
[CV(RS-EPT-CBR)]
[CV(TIM)]
[RPF]
[RS-EPT-CBR]
[TIM]
[103]
[104]
[105]
[106]
[4]
[107]
  bolAp2 454349 bolA 123 ctggtaaaagaaacactgatgcgaggcctgtgtttcaatctttaaatcagtaaacttcatAcgcttgacggaaaaaccagg
                              -35                  -10      +1                   
TAAACT GTGTTT [AIPP]
[TIM]
[103]
  bssSp 1121020 bssS 65 ttatctgtttccccctttaaaaattcggtgaatacccttacttattggtatactgaagttGcttcagataaaaacgcattg
                                              -10           +1                   
TGGTATACT   [CV(RS-EPT-CBR)]
[HTIM]
[RS-EPT-CBR]
[31]
[9]
[4]
  btuBp 4163399 btuB, murI 240 gaattcctatttgtgagctacgtctggacagtaacttgttacaacctgtagcatccacttGccggtcctgtgagttaatag
                         -35                     -10        +1                   
TAGCAT TGGACA [TIM] [108]
[109]
  btuDp 1793583 btuD 25 gaaaagtcatccagcgtttttccccggatatgacgccggaagatcccattgtgatggaaaGcattaaactggcgttggcaa
                         -35                      -10       +1                   
TGTGAT CGGATA [RE]
[TIM]
[39]
  btuEp 1794124 btuE 15 agcaggacgttagccgcaaaaagacggtctatgattaaaagctaagatttttactgaccaCacccaggagaaacgatgcaa
                          -35                     -10       +1                   
TTTACT GGTCTA [RE]
[TIM]
[39]
  btuEp2 1794129 btuE 20 ttaaaagcaggacgttagccgcaaaaagacggtctatgattaaaagctaagatttttactGaccacacccaggagaaacga
                          -35                      -10      +1                   
GATTTT AAGACG [RE]
[TIM]
[39]
  cadBp 4360106 cadA, cadB 75 tttgtgttatttcacctaatctttaggattaatccttttttcgtgagtaatcttatcgccAgtttggtctggtcaggaaat
                      -35                       -10         +1                   
TAATCT TTTAGG [HIPP]
[IMP]
[TIM]
[110]
  cadCp 4361963 cadC 29 ataatatgtaaataaacccatctatagatggtaaaaataggttgtggcaattatcattgcAtcattcccttttcgaatgag
                            -35                     -10     +1                   
TATCAT ATGGTA [HIPP]
[TIM]
[111]
  caiFp 34218 caiF 82 gatgacataagcaggatttagctcacacttatcgacggtgaagttgcatactatcgatatAtccacaattttaatatggcc
                      -35                        -10        +1                   
TACTAT CTCACA [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
[112]
[4]
  caiTp 42037 caiE, caiD, caiC, caiB, caiA, caiT 106 cgaaacaaaaatgtgataccaatcacagaatacagcttattgaatacccattatgagttaGccattaacgcgtccacgagg
                      -35                        -10        +1                   
CATTAT ATCACA [TIM] [113]
  canp 142703 can 33 ttacgttcttacactttatctgtggtttaaatcgtcccggagttgccctatattagccaaAcgtaattatttggttacagg
    [AIPP]
[CV(RS-EPT-CBR)]
[HTIM]
[IDA]
[RS-EPT-CBR]
[9]
[114]
[4]
  carAp1 29551 carA, carB 100 taatataaaaaatcccgccattaagttgacttttagcgcccatatctccagaatgccgccGtttgccagaaattcgtcggt
                          -35                    -10        +1                   
CAGAAT TTGACT [HIPP]
[TIM]
[115]
[116]
[117]
[118]
[119]
  carAp2 29619 carA, carB 32 gaaattcgtcggtaagcagatttgcattgatttacgtcatcattgtgaattaatatgcaaAtaaagtgagtgaatattctc
                           -35                     -10      +1                   
TAATAT TTGATT [HIPP]
[TIM]
[115]
[116]
[117]
[118]
[119]
  cas3p null cas3       [IHBCE] [120]
  casAp 2884319 cas2, cas1, casE, casD, casC, casB, casA 181 tttctttaataataaaacgaataacttgcagatttgaaatgcatgcattattgtctttaaAcaattcaacacatcttaata
                          -35                    -10        +1                   
TATTGT TTGCAG [TIM] [121]
  cblp 2060941 cbl 27 tggaataagatgcgggtttttattatttgttatgccgggcattagactttaacaataacgGgaaatctgaactgcccggag
                           -35                     -10      +1                   
AACAAT TTGTTA [HIPP]
[TIM]
[122]
  cbpAp1 1063833 cbpM, cbpA 58 gatgatttcaataacatattctgtgttggcatatgaaattttgaggattaccctacacttAtaggagttaccttacagggg
                                 -35                  -10   +1                   
TACACT ATGAAA [CV(RPF)]
[CV(RPF/TIM)]
[CV(TIM)]
[HIPP]
[RPF]
[TIM]
[123]
[124]
  cbpAp4 1063919 cbpM, cbpA 144 tggttcaactatcaaaaatcgctcaccctttttcacctgtttaaaatatgttcagcaaccCatcttgatggcgacctcctc
                    -35                   -10               +1                   
TAAAAT CGCTCA [TIM] [125]
  cbpAp6 1064037 cbpM, cbpA 262 ttccaggcctgtttcaaataattatttgcagtgcaactaattccatgtatattactacccAtatatagcgtctataaaatt
                         -35                    -10         +1                   
TATATT TTTGCA [TIM] [125]
  ccmAp null ccmH, ccmG, ccmF, ccmE, ccmD, ccmC, ccmB, ccmA       [TIM] [126]
  cddp 2231819 cdd 25 gcataattaatgagattcagatcacatataaagccacaacgggttcgtaaactgttatccCattacatgattatgaggcaa
                     -35                        -10         +1                   
TAAACT ATCACA [HIPP]
[TIM]
[127]
[128]
  cecRp 830669 ybhR, ybhS, ybhF, ybhG, cecR 26 cgttgctaaaattcttagccatactggacaactcccctatggagtcataatcttaatcaaTcatttgattaagaatggact
                              -35                 -10       +1                   
ATCTTA AACTCC [HIPP] [129]
  cedAp 1813742 cedA 79 tagaccaccagccagatcccgcttcggagactattctggaaacggtgttatgaaatacacGcaaagcgggacgtacagggg
                       -35                       -10        +1                   
TATGAA TTCGGA [HIPP] [130]
  cfap1 1741201 cfa 212 tacttaggctgctaacaaaattttgttgtatgattgaaattagcggcctatactaatttcGagttgttaaagctacgataa
                         -35                -10             +1                   
CGGCCTATACT GTTGTA [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
[105]
[4]
[131]
  cfap1 1741201 cfa 212 tacttaggctgctaacaaaattttgttgtatgattgaaattagcggcctatactaatttcGagttgttaaagctacgataa
                          -35                    -10        +1                   
TATACT TTGTAT [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
[105]
[4]
[131]
  chiAp 3469896 chiA 43 ttttaatgccgtaatttaattcatattgaagggttctcgtaaaacgtaaataattcctgcGtaggacttttgttttgcagt
                          -35                    -10        +1                   
AATAAT TTGAAG [HIPP]
[TIM]
[132]
  chiXp 507204 chiX 0 aaaagagtcatcttgcctaagagtattggcaggatggtgagattgagcgacaatcgagttAcaccgtcgcttaaagtgacg
                          -35                    -10        +1                   
GACAAT TTGGCA [TIM] [133]
[134]
  chop 1823492 cho 23 gtaacctttgtcatcgacccgcctcttttttaatcgcttcccgcctgttacactggatagAtaaccagcattcggagtcaa
                            -35                  -10        +1                   
TACACT TTTTAA [AIPP] [15]
  chpSp1 4448402 chpS, chpB 45 atctattaacgcataaaaaactctgctggcattcacaaatgcgcaggggtaaaacgtttcCtgtagcaccgtgagttatac
                          -35                     -10       +1                   
TAAAAC CTGGCA [HIPP]
[IMP]
[TIM]
[135]
[136]
  chpSp2 4448428 chpS, chpB 19 tggcattcacaaatgcgcaggggtaaaacgtttcctgtagcaccgtgagttatactttgtAtaacttaaggaggtgcagat
                              -35                  -10      +1                   
TATACT GTTTCC [HIPP]
[TIM]
[135]
[136]
  cirAp1 2246929 cirA 160 ggatataaaatttaacatttggattgataattgttatcgtttgcattatcgttacgccgcAatcaaaaaaggctgacaaat
                        -35                    -10          +1                   
TATCGT TTGATA [HIPP]
[TIM]
[137]
  cirAp2 2246942 cirA 173 tgacaaatcatgcggatataaaatttaacatttggattgataattgttatcgtttgcattAtcgttacgccgcaatcaaaa
                         -35                    -10         +1                   
TATCGT TTAACA [TIM] [137]
  clpAp1 923080 clpA 184 ttacactccgatggagtttgttattgacgtgttacaaaaattcttttcttatgatgtagaAcgtgcaacgcaattgatgct
                        -35                       -10       +1                   
TATGAT TTGACG [HIPP]
[TIM]
[138]
  clpBp 2734205 clpB 32 ttttcacattaatctggtcaataaccttgaataattgagggatgacctcatttaatctccAgtagcaactttgatccgtta
                           -35                -10           +1                   
CCTCAT TTGAAT [AIPP]
[CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[IDA]
[IEP]
[RS-EPT-CBR]
[TIM]
[139]
[114]
[4]
[140]
[141]
  clpBp 2734205 clpB 32 ttttcacattaatctggtcaataaccttgaataattgagggatgacctcatttaatctccAgtagcaactttgatccgtta
                           -35                       -10    +1                   
TAATCT TTGAAT [AIPP]
[CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[IDA]
[IEP]
[RS-EPT-CBR]
[TIM]
[139]
[114]
[4]
[140]
[141]
  clpPp1 456577 clpP, clpX 100 accgtgcgaaaagcctctttcggtgttagcgtaacaacaaaagattgttatgcttgaaatAtggtgatgccgtacccataa
                          -35                    -10        +1                   
TATGCT TTAGCG [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
[142]
[4]
  cmkp 961165 cmk, rpsA 36 aaactggtttttgcacacaacgttaacgatttgtggcgtcggcgcgtataatgcgcgcggTtatgttaacggtacgcctgt
                       -35                     -10          +1                   
TATAAT TTAACG [HIPP]
[TIM]
[143]
  cmoMp 973404 cmoM, mukF, mukE, mukB 133 acatcagcggaagtggcagcaacatattgccaatcacttttttcagtgtaaaaagcatccTttctggttccttttttaacc
                           -35                   -10        +1                   
TAAAAA TTGCCA [HIPP] [144]
  cobUp1 2065874 cobT, cobS, cobU 110 aagtctggctattccgtaatgccatcttatttcgtaatggattgagaatgctggatttttAattatattacgcgcagtatt
                        -35                    -10          +1                   
AATGCT ATCTTA [HIPP]
[RPF]
[145]
  cobUp2 2065972 cobT, cobS, cobU 208 gttgttccggcagtagcattaattcattatctgaatgaaatgtgtcaatccacagaaaccGctgtcaatgacgcattttgt
                       -35                     -10          +1                   
AATCCA TTCATT [HIPP]
[TIM]
[145]
  codBp 354884 codB, codA 38 aaaaatatatttccccacgaaaacgattgctttttatcttcagatgaatagaatgcggcgGattttttgggtttcaaacag
                           -35                   -10        +1                   
TAGAAT TTGCTT [HIPP]
[TIM]
[146]
  copAp 511411 copA 32 acccgcctggtttattaatttcttgaccttccccttgctggaaggtttaacctttatcacAgccagtcaaaactgtcttaa
                       -35                      -10         +1                   
TAACCT TTGACC [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
[147]
[148]
[4]
[149]
  corAp 4001194 corA 232 gttctgtggtgttctgttgcgtgttgacggcaaaattttgctggcgtaacatgcgcgcacGatcactctaagaggacattc
                        -35                    -10          +1                   
TAACAT TTGACG [HIPP] [150]
  cpdBp 4436629 cpdB 64 tgcgccaactgtgatagtgtcatcattttcaaagcgtaaaattgtggcattcttcactgtTctataagtaagacgtttatt
                           -35                  -10         +1                   
CATTCT TTTCAA [TIM] [151]
  cpxPp 4105785 cpxP, cpxQ 35 ctttacgttgttttacaccccctgacgcatgtttgcagcctgaatcgtaaactctctatcGttgaatcgcgacagaaagat
                      -35                       -10         +1                   
TAAACT CTGACG [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[HTIM]
[RS-EPT-CBR]
[TIM]
[152]
[9]
[4]
[73]
  cpxRp 4105686 cpxA, cpxR 16 gggggtgtaaaacaacgtaaagtcatggattagcgacgtctgatgacgtaatttctgcctCggaggtatttaaacaatgaa
                         -35                     -10        +1                   
TAATTT ATGGAT [HIPP] [152]
  creAp 4635477 creA, creB, creC, creD 44 ttagggcttgacggaaataaaagtattgagattttgttcttaatcaatatgttatttaccGtgacgaactaattgctcgtg
                          -35                   -10         +1                   
TATGTT TTGAGA [HIPP] [153]
  crpp1 3485953 crp 167 gggtcatgctgaagcgagacaccaggagacacaaagcgaaagctatgctaaaacagtcagGatgctacagtaatacattga
                 -35                        -10             +1                   
TATGCT AGACAC [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[154]
[155]
[4]
  csgAp 1104236 csgA 211 agtagcaaccgggcaaagattgaccagacaggagattataaccttgcatatattgatcagGcgggcagtgccaacgatgcc
                                                 -10        +1                   
TATATT   [TIM] [39]
  csgBp 1103859 csgB, csgA, csgC 92 aagaaaaatacaacgcgcgggtgagttattaaaaatatttccgcagacatactttccatcGtaacgcagcgttaacaaaat
                          -35                   -10         +1                   
CATACTT TTATTA [CV(RPF)]
[CV(RPF/TIM)]
[CV(TIM)]
[RPF]
[TIM]
[156]
[157]
  csgBp 1103859 csgB, csgA, csgC 92 aagaaaaatacaacgcgcgggtgagttattaaaaatatttccgcagacatactttccatcGtaacgcagcgttaacaaaat
                             -35                -10         +1                   
CATACTTTCCA TTAAAA [CV(RPF)]
[CV(RPF/TIM)]
[CV(TIM)]
[RPF]
[TIM]
[156]
[157]
  csgBp 1103859 csgB, csgA, csgC 92 aagaaaaatacaacgcgcgggtgagttattaaaaatatttccgcagacatactttccatcGtaacgcagcgttaacaaaat
                             -35                  -10       +1                   
TACTTT TTAAAA [CV(RPF)]
[CV(RPF/TIM)]
[CV(TIM)]
[RPF]
[TIM]
[156]
[157]
  csgDp1 1103344 csgG, csgF, csgE, csgD 148 agttacatttagttacatgtttaacacttgatttaagatttgtaatggctagattgaaatCagatgtaatccattagtttt
                            -35              -10            +1                   
ATGGCTAGATT TTGATT [TIM] [158]
[159]
  csgDp1 1103344 csgG, csgF, csgE, csgD 148 agttacatttagttacatgtttaacacttgatttaagatttgtaatggctagattgaaatCagatgtaatccattagtttt
                            -35                   -10       +1                   
TAGATT TTGATT [TIM] [158]
[159]
  csgDp2 1103335 csgG, csgF, csgE, csgD 139 tagttacatgtttaacacttgatttaagatttgtaatggctagattgaaatcagatgtaaTccattagttttatattttac
                        -35                     -10         +1                   
AAATCA TTAAGA [TIM] [159]
  csgDp2 1103335 csgG, csgF, csgE, csgD 139 tagttacatgtttaacacttgatttaagatttgtaatggctagattgaaatcagatgtaaTccattagttttatattttac
                        -35                -10              +1                   
GATTGAAATCA TTAAGA [TIM] [159]
  csgDp2 1103335 csgG, csgF, csgE, csgD 139 tagttacatgtttaacacttgatttaagatttgtaatggctagattgaaatcagatgtaaTccattagttttatattttac
                   -35                   -10                +1                   
TAGATTGAAATC TTGATT [TIM] [159]
  csiEp 2665401 csiE 34 cttgccaacatttctgatgattagcattcccttcgccatttccttgagcaaactttagctAttcttatcaattatgcttat
                           -35                     -10      +1                   
AACTTT TTCCCT [HIPP]
[TIM]
[160]
  csiEp 2665401 csiE 34 cttgccaacatttctgatgattagcattcccttcgccatttccttgagcaaactttagctAttcttatcaattatgcttat
                           -35               -10            +1                   
TGAGCAAACTT TTCCCT [HIPP]
[TIM]
[160]
  cspAp1 3719889 cspA 160 aatcataaatatgaaaaataattgttgcatcacccgccaatgcgtggcttaatgcacatcAacggtttgacgtacagacca
                         -35                      -10       +1                   
TAATGC TTGCAT [CV(RS-EPT-CBR)]
[CV(TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM]
[161]
[31]
[4]
[162]
  cspAp2 3719940 cspA 109 atgcacatcaacggtttgacgtacagaccattaaagcagtgtagtaaggcaagtcccttcAagagttatcgttgatacccc
                     -35                     -10            +1                   
TAAGGC GTACAG [TIM] [161]
[162]
  cspDp 922676 cspD 86 tgccccttgtcccctgtcaaatgcttgacggctcgccctaattctctaaattgtatttctAgagttggcgaggttttgaac
                         -35                   -10          +1                   
TAAATT TTGACG [HIPP]
[TIM]
[163]
  cspEp1 657147 cspE 145 gtactttgcctggatgcgctttcagttttgagacaaatgaagttttagtaacttctttaaAatcaatagctaaaataagta
                            -35                  -10        +1                   
TAACTT TTGAGA [AIPP] [164]
  cspEp2 657250 cspE 42 tatcactttttagtaaagttacactggacaaagcgtaccacaattggtgtactggtaaccGacacagcatttgtgtctatt
                         -35                      -10       +1                   
TACTGG TGGACA [AIPP]
[TIM]
[15]
[164]
  csqRp 4074641 csqR 28 agccgggatccctgactgtgatcaaacccgatcttttttgtcactttttgtataaaatgcCagggtgatggtttttcgagg
    [IHBCE]
[RE]
[TIM]
[165]
[166]
  csrAp1 2819373 csrA 227 tacctgcagcgttagccagtgtgaaaggctgggtcagcgcgaaattgcaataatataagcGtcaggcaatgccgtggactc
                         -35                -10             +1                   
ATTGCAATAAT AAGGCT [HIPP]
[TIM]
[167]
  csrAp1 2819373 csrA 227 tacctgcagcgttagccagtgtgaaaggctgggtcagcgcgaaattgcaataatataagcGtcaggcaatgccgtggactc
                             -35                   -10      +1                   
TAATAT CTGGGT [HIPP]
[TIM]
[167]
  csrAp2 2819370 csrA 224 ctgcagcgttagccagtgtgaaaggctgggtcagcgcgaaattgcaataatataagcgtcAggcaatgccgtggactcgct
                          -35                   -10         +1                   
TAATAT CTGGGT [HIPP]
[TIM]
[167]
  csrAp5 2819189 csrA 43 ttagatgtaatgtgtttgtcattgcttactttttggcgttatatgatggataatgccgggAtacagagagacccgactctt
                      -35                        -10        +1                   
GATAAT TTGCTT [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
[4]
[167]
  csrBp 2924524 csrB 0 ccttaaggcattgtctgtaagcgccttgtaagacttcgcgaaaaagacgattctatcttcGtcgacagggagtcagacaac
                            -35                       -10   +1                   
TATCTT GTAAGA [CV(RS-EPT-CBR)]
[CV(TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM]
[168]
[9]
[4]
  cstAp2 629864 cstA 30 atttacatggttgctgtgttgttaaattgtacaaagatgttatagaaacaaaatgtaacaTctctatggacacgcacacgg
                      -35                        -10        +1                   
CAAAAT TTAAAT [TIM] [169]
  cstAp3 629873 cstA 21 gttgctgtgttgttaaattgtacaaagatgttatagaaacaaaatgtaacatctctatggAcacgcacacggataacaact
                    -35                        -10          +1                   
TAACAT GTACAA [TIM] [169]
  cusCp 595573 cusC, cusF, cusB, cusA 27 tgacaattttgtcatttttctgtcaccggaaaatcagagcctggcgagtaaagttggcggCataaaatcaccagaaattat
                      -35                        -10        +1                   
TAAAGT GTCACC [HIPP]
[TIM]
[170]
[171]
  cusRp 595462 cusS, cusR 19 aaaattgtcattttgccaataagcgattgccatctgatcccgctactctagaattgcccgGgcaacatgcggaggaaatat
                           -35                   -10        +1                   
TAGAAT TTGCCA [HIPP]
[TIM]
[170]
[171]
  cutAp 4365392 cutA 36 cacgccccgctttctttcccgccgactaacatccttcccccgtccgttgtatagtgacctCtctcttgcggttccatctgt
                          -35                     -10       +1                   
TATAGT CTAACA [TIM] [172]
  cvpAp1 2430800 ubiX, purF, cvpA 37 attgatgcgcgggaaggaaatccctacgcaaacgttttctttttctgttagaatgcgcccCgaacaggatgacagggcgta
                        -35                      -10        +1                   
TAGAAT CTACGC [CV(TIM)]
[HIPP]
[HTIM]
[TIM]
[31]
[173]
[174]
  cyaAp 3990999 cyaA 154 tacacttgtatgtagcgcatctttctttacggtcaatcagcaaggtgttaaattgatcacGttttagaccattttttcgtc
                          -35                    -10        +1                   
TAAATT TTTACG [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[175]
[176]
[177]
[4]
  cyaAp2 3990774 cyaA 379 cagagtgcaagtgggctttggcgtgtggcaattcttaaaacattgtctaacatgcttgttAccgtcattatcatccgtggt
                         -35                    -10         +1                   
TAACAT GTGGCA [TIM] [175]
  cyaRp 2167114 cyaR 0 tggaaaattcttagaaaccgatcacatacagctgcatttattaaggttatcatccgtttcGctgaaaaacataacccataa
                         -35               -10              +1                   
AAGGTTATCAT CATACA [AIPP]
[CV(RS-EPT-CBR)]
[CV(TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM]
[178]
[179]
[31]
[4]
  cyaRp 2167114 cyaR 0 tggaaaattcttagaaaccgatcacatacagctgcatttattaaggttatcatccgtttcGctgaaaaacataacccataa
                          -35                   -10         +1                   
TATCA ATACAG [AIPP]
[CV(RS-EPT-CBR)]
[CV(TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM]
[178]
[179]
[31]
[4]
  cyaRp 2167114 cyaR 0 tggaaaattcttagaaaccgatcacatacagctgcatttattaaggttatcatccgtttcGctgaaaaacataacccataa
                     -35                        -10         +1                   
TATCAT ATCACA [AIPP]
[CV(RS-EPT-CBR)]
[CV(TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM]
[178]
[179]
[31]
[4]
  cydAp1 771170 cydA, cydB 288 ttgatatttatcaatgtataagtcttggaaatgggcatcaaaaagagataaattgttctcGatcaaattggctgaaaggcg
                         -35                     -10        +1                   
TAAATT TTGGAA [TIM] [180]
  cydAp2 771284 cydA, cydB 174 atgcaaatttgcttcaacaaaaacctgtttattgtaaggattttgcggcgtaatatatacGtgggatcaatttgagttttt
                            -35                    -10      +1                   
TAATAT TTTATT [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
[180]
[181]
[4]
  cydAp3 771202 cydA, cydB 256 gggcatcaaaaagagataaattgttctcgatcaaattggctgaaaggcggtaatttagctAtaaattgatcaccgtcgaaa
                              -35                  -10      +1                   
TAATTT ATCAAA [HIPP]
[TIM]
[182]
  cydAp4 771213 cydA, cydB 245 agagataaattgttctcgatcaaattggctgaaaggcggtaatttagctataaattgatcAccgtcgaaaaatgcaaattt
                         -35                     -10        +1                   
TATAAA TTGGCT [HIPP]
[TIM]
[182]
  cydAp5 771368 cydA, cydB 90 aacatgtttgcaacctttctttacgccgtttttgtgtgcattcacatggtatgatgaaagTgttcaaacaaatttctattg
                             -35                  -10       +1                   
TATGAT TTTTTG [HIPP]
[TIM]
[182]
  cydDp 931031 cydC, cydD 69 aaaataattttacaaatcagtaacaaaagtaaagaaggcgacaccatgcgactatgggtcGcctttattttttccccgttg
                             -35                  -10       +1                   
GACTAT GTAAAG [TIM] [183]
  cynRp 358709 cynR 19 aggcagactactcgccgattgtcataaggtaaaagtctcatttatgatgagttccattggAtttacttataggttgcgaat
                             -35                       -10  +1                   
CATTGG GTAAAA [HIPP]
[TIM]
[184]
  cynTp 358773 cynT, cynS, cynX 26 atggaactcatcataaatgagacttttaccttatgacaatcggcgagtagtctgcctctcAttccagagacagacagaggt
                          -35                   -10         +1                   
TAGTCT TTACCT [HIPP]
[TIM]
[184]
[185]
  cyoAp 451653 cyoE, cyoD, cyoC, cyoB, cyoA 43 tccaagtaacaggaatttaatcatgtttacagtaatgtaaccttcccgtaaaatgcccacAcactttaaacgccaccagat
                          -35                    -10        +1                   
TAAAAT TTTACA [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[186]
[187]
[4]
  cysBp 1333788 cysB 67 atacactaaggctataaatgatatagtggttatagttagcaccttttttattattaaatcGtattagtcacccgccaggtg
                          -35                    -10        +1                   
TATTAT GTGGTT [HIPP] [188]
  cysDp 2876368 cysC, cysN, cysD 39 aactactcattctaattggtaatttcattcgttctcttacgctccctatagtcgaaacatCtgatggcaagaaaatagcgg
                        -35                    -10          +1                   
TATAGT TTCATT [HIPP]
[TIM]
[189]
  cysGp1 3497754 cysG 74 tgggtaatactttatcaggtgccgtattcatgggattgggttattggtatgctacgccgaAagcgaatcgtccggttgcgg
                           -35                  -10         +1                   
TATGCT TTCATG [CV(RPF)]
[CV(RPF/TIM)]
[CV(TIM)]
[HIPP]
[IMP]
[RPF]
[TIM]
[190]
[191]
  cysJp 2891964 cysH, cysI, cysJ 66 ggttattagttatcgctatcccgtctttaatccacaccgtttgccccgttaaccttacctTctcttctgttttatgggcgc
                          -35                     -10       +1                   
TAACCT TTTAAT [TIM] [192]
  cysKp1 2532377 cysK 32 gtatatagatatgctaaatccttacttccgcatattctctgagcgggtatgctacctgttGtatcccaatttcatacagtt
                      -35                       -10         +1                   
TATGCT TTACTT [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[193]
[9]
[4]
  cysPp 2543557 cysM, cysA, cysW, cysU, cysP 29 accaaacggtatataaaaccgttactcctttcacgtccgttataaatatgatggctattaGaaagtcattaaatttataag
                      -35                      -10          +1                   
TATGAT TTACTC [TIM] [194]
  cytRp 4124509 cytR 53 cacacttttcatgaaaattctgtaaccgttttcacgcgctatctgctaaaaatgttgccgAtgtgaagtaaacatggatgt
                      -35                      -10          +1                   
TAAAAA GTAACC [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[195]
[4]
  dacCp 880653 dacC 74 gcaggatattgcataaactttaaaaactttaccaacttacggtttctttaagtttgtgtgTgcgttattaatcaccaaact
                            -35                  -10        +1                   
TAAGTT TTTACC [AIPP] [15]
  dadAp1 1237509 dadA, dadX 62 tcagggagatgtgagccagctcaccataaaaaagccgcatgttgaataatattttcaactGagttatcaagatgtgattag
                          -35                     -10       +1                   
TATTTT ATAAAA [TIM] [196]
[197]
[198]
  dadAp2 1237525 dadA, dadX 46 cagctcaccataaaaaagccgcatgttgaataatattttcaactgagttatcaagatgtgAttagattattattcttttac
                          -35                       -10     +1                   
CAAGAT TTGAAT [TIM] [199]
[196]
[197]
[198]
  dadAp3 1237538 dadA, dadX 33 aaaagccgcatgttgaataatattttcaactgagttatcaagatgtgattagattattatTcttttactgtatctaccgtt
                              -35                      -10  +1                   
TATTAT CTGAGT [TIM] [196]
[197]
[198]
  damXp 3517600 trpS, gph, rpe, dam, damX 294 cgcggacgtcggaacgtctcgggcagtttagttctgccgaaacgcagcgtattataacccTgctcaagcgggctgggttac
                           -35                    -10       +1                   
TATTAT TTTAGT [HIPP]
[TIM]
[75]
  damp1 3516252 trpS, gph, rpe, dam 339 agaccgcaggtaatgttggttcgttgaaatcggcaccgtccagccattacactctgcagcTgagcagttcctctaactacg
                        -35                     -10         +1                   
TACACT TTGAAA [HIPP]
[TIM]
[75]
  damp2 3515982 trpS, gph, rpe, dam 69 aggtacaggccgatctgaagtaatcaaggttatctcccgcaatggtttatcgttgcgggaGttgcctgaagcgctggatgc
                       -35                      -10         +1                   
TATCGT ATCAAG [HIPP]
[TIM]
[75]
[200]
  dapAp 2599784 bamC, dapA 24 aacaatcagaacggttctgtctgcttgcttttaatgccataccaaacgtaccattgagacActtgtttgcacagaggatgg
                         -35                     -10        +1                   
TACCAT TTGCTT [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
[201]
[4]
  dapBp1 28343 dapB 31 atttctaattatcagcgtttttggctggcggcgtagcgatgcgctggttactctgaaaacGgtctatgcaaattaacaaaa
                         -35                     -10        +1                   
TACTCT CTGGCG [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
[202]
[203]
[4]
  dapBp2 28288 dapB 86 tgcagtcattcatcgactcatgcctttcactgatatccctccctgtttatcattaatttcTaattatcagcgtttttggct
                          -35                   -10         +1                   
TATCAT TTCACT [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[202]
[4]
  dapDp 185977 dapD 30 ttgcagcaggaagtgcatcagcggttgacagaggccctcaatccaaacgataaagggtgaTgtgtttactgatatgaaaag
                         -35                  -10           +1                   
AACGAT TTGACA [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[204]
[4]
  dapEp 2591560 dapE, ypfN 47 aaatgcctgcaattatcaaacgtccattgctctgcgtgcccggtaagcctatgctgctggGtttcagtgattccagttatc
                           -35                    -10       +1                   
TATGCT TTGCTC [HIPP]
[IDA]
[205]
  dctAp 3683498 dctA 51 ttgtttcaattatgatccaggtacatttctgtgatgttgtctgggtgttattttaaggccGcaggtaccccataaccttac
                          -35                    -10        +1                   
TATTTT TTTCTG [TIM] [206]
  dcuAp 4366843 dcuA 70 aagcgaacagtaatcgtacagggtagtacaaataaaaaaggcacgtcagatgacgtgcctTttttcttgtgagcagtaact
                        -35                   -10           +1                   
TCAGAT TAGTAC [TIM] [76]
[88]
  dcuBp 4348764 fumB, dcuB 20 gaaaacagttcatacaaaacagaacgtgactgtgatctattcagcaaaaatttaaataggAttatcgcgagggttcacaca
                                              -10           +1                   
AAAAAT   [TIM] [88]
  dcuDp 3374766 dcuD 103 tacaaaataatcataagcgcatattttttaatgaaaaatcacctcacctacaattaaaaaCacgacatccgcaccataaat
                           -35                   -10        +1                   
TACAAT TTTAAT [HIPP]  
  dcuRp 4350565 dcuR 531 acgatcccacgaatttatgaataaattgcatgtgattctcggattattgcatctgaagagTtataagcagttggaagatta
                  -35                        -10            +1                   
TATTGC TGAATA [TIM] [207]
  dcuSp 4351685 dcuR, dcuS 23 atatagccaatcattcttactccctttgaattacccgcctcatcagagataatgcttaagAaatttgtcacacaaggaagc
                          -35                   -10         +1                   
GATAAT TTGAAT [HIPP]
[TIM]
[208]
  decRp 468352 decR 31 tgccgtggtgtttaaaccgcacagaataaattgtcgtgatttcacctttaaaataaaattAaaagagaaaaaaattctctg
                               -35                    -10   +1                   
TAAAAT TTGTCG [AIPP] [15]
  defp 3433650 def, fmt 40 caatctttgcgattggtcagtgatgctgtcaatcagagggggatttgtctagaatagaagAaataatctttctaactcctg
                          -35                     -10       +1                   
TAGAAT CTGTCA [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[209]
[4]
  degQp 3380698 degQ 45 gactatcatttaatctggtgtctcattgttagccgtctgaaaattcaataacatcaaactGttttgaatctcttttcttat
                          -35                    -10        +1                   
TAACAT TTGTTA [TIM] [210]
  degSp 3382173 degS 27 tcgtaaaccgggcatcaggcttacgtgtgatgtccggttaactcgtggtatgctgctgccGttcccttttttaatgacgcc
                           -35                   -10        +1                   
TATGCT GTGATG [TIM] [210]
  deoBp 4619567 deoB, deoD 36 gcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgAtcatttaaatttgaagcact
                                                 -10        +1                   
TATACT   [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
[4]
[211]
  deoCp1 4616679 deoC, deoA, deoB, deoD 644 gaggtaacgccagaaacgttttattcgaacatcgatctcgtcttgtgttagaattctaacAtacggttgcaacaacgcatc
                        -35                      -10        +1                   
TAGAAT TTCGAA [TIM] [212]
  deoCp2 4617278 deoC, deoA, deoB, deoD 45 gatttccttaattgtgatgtgtatcgaagtgtgttgcggagtagatgttagaatactaacAaactcgcaaggtgaatttta
                       -35                       -10        +1                   
TAGAAT ATCGAA [TIM] [212]
  dgcZp 1623879 dgcZ 29 aacttcggatttctatgaaaatattgacgtaattttgcttttctctcgttagaatagcgcGcacaaggaactgtgaaaaag
                        -35                       -10       +1                   
TAGAAT TTGACG [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[HTIM]
[RS-EPT-CBR]
[TIM]
[213]
[9]
[4]
[73]
  dgoRp 3875185 dgoT, dgoD, dgoA, dgoK, dgoR 25 tcatcacgctggtactacaaagttgccgcgttatgcatcgatcggggtaaagtagagaagAacatacagagcacaaggact
    [AIPP]
[IDA]
[214]
  dicBp 1649597 dicB, ydfD, ydfE, insD7, intQ 12 attgttaactggttaacgtcacctggaggcaccaggcactgcatcacaaaattcattgttGaggacgcgataatgaaaacg
                       -35                     -10          +1                   
CAAAAT CTGGAG [HIPP]
[TASES]
[215]
  dicCp 1647876 ydfW, ydfX, dicC 26 catagttagctaatgctaaatcgtattgactatgtttttgttaacatctatcttgttagtTatgactaacaataaaggtgt
                          -35                    -10        +1                   
TATCTT TTGACT [HIPP]
[TIM]
[216]
  dinBp 250880 dinB, yafN, yafO, yafP 18 cgcgttaaatgctgaatctttacgcatttctcaaaccctgaaatcactgtatactttaccAgtgttgagaggtgagcaatg
                            -35              -10            +1                   
CACTGTATACT TTCTCA [AIPP] [15]
  dinBp 250880 dinB, yafN, yafO, yafP 18 cgcgttaaatgctgaatctttacgcatttctcaaaccctgaaatcactgtatactttaccAgtgttgagaggtgagcaatg
                            -35                   -10       +1                   
TATACT TTCTCA [AIPP] [15]
  dinGp 833073 dinG, ybiB -3 ctgaaaaccgaaaaatgccacaatattggctgtttatacagtatttcaggttttctcatgGcattaaccgccgcgcttaaa
                          -35                  -10          +1                   
CAGGTT TTGGCT [AIPP]
[HIPP]
[217]
  dinIp 1121509 dinI 22 aaacaataaaaatcgtagcttcctgttgtcattaggttattttacctgtataaataaccaGtatattcaacagggggctat
                                                 -10        +1                   
TATAAA   [HTIM]
[IHBCE]
[31]
[218]
  dinJp 246615 yafQ, dinJ 113 gtatcccggatcgtttctgaacaaacttaataaaccattattataaaattaacatatataTttcagttaattatgtaaaaa
                 -35                        -10             +1                   
TAAAAT CTGAAC [AIPP] [15]
  dinQp 3647982 dinQ 194 actgaaactattgcaaggacgtgctggttttataacctgcatgtactgtatgattatccaGttagctctgaggcattttca
                          -35                     -10       +1                   
ATGATT GGTTTTA [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[4]
[219]
  dksAp2 160657 gluQ, dksA 53 ttgtcaagtgttacgtttagataattgctatccggaaaagcatctgctatttatagcggcCtcatttttcccccgaacatg
                         -35                    -10         +1                   
TATTTA TTGCTA [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[220]
[221]
[222]
[4]
  dksAp3 160751 gluQ, dksA 147 cttaaaaaatcactgccggttacattgtagtaaagtaagtaactggttaatttacattctGgtcgcgtgcgcaaatacgct
                         -35                    -10         +1                   
TAATTT TTGTAG [TIM] [223]
  dmsAp1 940823 dmsA, dmsB, dmsC 136 ttttgtctccctttgataccgaacaataattactcctcacttacacgtaatactactttcGagtgaaaatctacctatctc
                          -35                   -10         +1                   
TAATAC ATAATT [CV(RS-EPT-CBR)]
[CV(TIM)]
[NAS]
[RS-EPT-CBR]
[TIM]
[224]
[4]
  dmsCp 943957 dmsC 76 catggcgatctggcggccgttgcgccgttgccgcgagctcactttaccaaaccgaatattGtgatcaaacccaatgccaat
                         -35                        -10     +1                   
CCGAAT CCGTTG [RE]
[TIM]
[39]
  dnaAp2 3883882 recF, dnaN, dnaA 153 ataaatcgggaaaatctgtgagaaacagaagatctcttgcgcagtttaggctatgatccgCggtcccgatcgttttgcagg
                              -35                   -10     +1                   
TATGAT AGATCT [TIM] [225]
[226]
  dnaNp1 3882733 recF, dnaN 412 aacgacattcgtttgccgggcgaagtggcgttctttatcgccaagcgtctacgatctaacGtacgtgagctggaaggggcg
                         -35                 -10            +1                   
GCGTCTACGAT GTGGCG [HIPP]
[TIM]
[227]
[228]
  dnaNp1 3882733 recF, dnaN 412 aacgacattcgtttgccgggcgaagtggcgttctttatcgccaagcgtctacgatctaacGtacgtgagctggaaggggcg
                         -35                      -10       +1                   
TACGAT GTGGCG [HIPP]
[TIM]
[227]
[228]
  dnaNp2 3882590 recF, dnaN 269 tgaggcgctgcgcgacttgctggcattgcaggaaaaactggtcaccatcgacaatattcaGaagacggtggcggagtacta
                          -35                        -10    +1                   
AATATT TTGCAG [HIPP]
[TIM]
[227]
[228]
  dnaNp2 3882590 recF, dnaN 269 tgaggcgctgcgcgacttgctggcattgcaggaaaaactggtcaccatcgacaatattcaGaagacggtggcggagtacta
                          -35                -10            +1                   
CCATCGACAAT TTGCAG [HIPP]
[TIM]
[227]
[228]
  dnaNp3 3882562 recF, dnaN 241 caggaaaaactggtcaccatcgacaatattcagaagacggtggcggagtactacaagatcAaagtcgcggatctcctttcc
                             -35                    -10     +1                   
TACAAG TTCAGA [HIPP]
[TIM]
[227]
[228]
  dnaNp4 3882348 recF, dnaN 27 gccgtaagatcgagcagttgcgtgaagagagccacgatatcaaagaagatttttcaaattTaatcagaacattgtcatcgt
                      -35                       -10         +1                   
GATTTT GTGAAG [HIPP]
[TIM]
[227]
[228]
  dnaNp4 3882348 recF, dnaN 27 gccgtaagatcgagcagttgcgtgaagagagccacgatatcaaagaagatttttcaaattTaatcagaacattgtcatcgt
                               -35                -10       +1                   
TTTTTCAAATT GCCACG [HIPP]
[TIM]
[227]
[228]
  dppAp 3707870 dppF, dppD, dppC, dppB, dppA 165 tggtgtaaatcccggttggctgtattgacgttttcacattctgttgacagattgtaggtcAcgaggggcattttatggagg
                         -35                      -10       +1                   
GATTGT TTGACG [CV(RS-EPT-CBR)]
[CV(TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM]
[229]
[31]
[4]
  dpsp 848950 dps 39 attagtgtgataggaacagccagaatagcggaacacatagccggtgctatacttaatctcGttaattactgggacataaca
                          -35              -10              +1                   
GGTGCTATACT TAGCGG [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[230]
[231]
[4]
  dpsp 848950 dps 39 attagtgtgataggaacagccagaatagcggaacacatagccggtgctatacttaatctcGttaattactgggacataaca
                         -35                    -10         +1                   
TATACT ATAGCG [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[230]
[231]
[4]
  dsbAp 4043377 dsbA 41 ttactggctgcgacagacggcgacttttatagaacaggcaaaagttctacaagaacccccTttgcaattaacacctatgta
                          -35                   -10         +1                   
TACAAG TTTATA [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[RS-EPT-CBR]
[TIM]
[232]
[4]
  dsdAp 2479121 dsdA 81 ctggctagtgaagcaatattgcggcgctacgctcaatgaaacatttaaatactatacgacAgcgacatttatcgcttcagt
                           -35                    -10       +1                   
TACTAT CTACGC [TIM] [233]
  dsdCp 2477746 dsdC 117 aaaaaacaacgcaggctgacaaacgataaaatttgcctttcacatgaggtaaattgcatcAatggagtgatttacatctaa
                          -35                     -10       +1                   
TAAATT ATAAAA [AIPP] [15]
  dsdXp 2477821 dsdX, dsdA 26 catgtgaaaggcaaattttatcgtttgtcagcctgcgttgtttttttgtccaatatcatcAggttaatcacaggggaaggt
                                 -35                  -10   +1                   
TATCAT CTGCGT [TIM] [234]
  dsrAp 2025313 dsrA 0 ttaatcattcatatggcgaatattttcttgtcagcgaaaaaaattgcggataaggtgatgAacacatcagatttcctggtg
                            -35                    -10      +1                   
TAAGGT TTGTCA [HIPP]
[TIM]
[235]
  dusBp 3410246 dusB, fis 34 ctcagaggattggtcaaagtttggcctttcatctcgtgcaaaaaatgcgtaatatacgccGccttgcagtcacagtatggt
                           -35                    -10       +1                   
TAATAT TTTCAT [CV(RPF)]
[CV(RPF/TIM)]
[CV(TIM)]
[HIPP]
[RPF]
[TIM]
[236]
[237]
[238]
[239]
  dutp 3813852 dut, slmA 77 tgtttcccagccaactcaaggatttaacagcgacaacaacgcattacaccttttctggcaGgacggagataaagtcttacc
                        -35                  -10            +1                   
TACACC TTAACA [HIPP] [240]
  ebgAp 3222551 ebgA, ebgC 82 tgctgccgtttattttcgtgatccagttaaagtaaatgcatttacctgctactttttagtAaaaattttactaaactcccc
                           -35                    -10       +1                   
TACTTT TTAAAG [AIPP] [15]
  ecpAp 310797 ecpA 126 gcaacctaaatcgattgccagaattgaaaattgtagtgtgaagacagtgtatacccatcgGcgtaatgctgaggccaagct
                        -35                       -10       +1                   
TATACC TTGAAA [ICWHO] [15]
  eddp1 1934713 eda, edd 109 ttttacactttcaggcctcgtgcggattcacccacgaggctttttttattacactgactgAaacgtttttgccctatgagc
                           -35                    -10       +1                   
TACACT TTCACC [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[241]
[4]
  efeUp 1081307 efeU 49 ttataaacattccgcttgtgtttttctttgccgtaatgataatcgctatcactgcgatttActtttctttgcatagattga
    [HIPP]
[TIM]
[73]
  efpp 4375567 efp 132 aaagctttttggcgctgcgtccggctaacagtttttcctccgcgtctatattcaaaagacGcagaagttcatcaggatcgg
                         -35                   -10          +1                   
TATATT CTAACA [HIPP] [242]
  enop4 2907968 eno 27 gtaaaaaagttagagcggcaacgcgtaccctgggtacgcgttgtttgtctggagtttcagTttaactagtgacttgaggaa
                                                 -10        +1                   
CTGGAGTT   [CV(RS-EPT-CBR)]
[HTIM]
[RS-EPT-CBR]
[6]
[4]
  enop7 2908152 eno 211 tctgcgcgttgcgggccgttccggggatgatcagttggtcgagatcatcgaagttccgaaTcacccgtggttcgtggcttg
                                               -10          +1                   
ATCGAAGT   [HTIM] [6]
  entCp 624831 entC, entE, entB, entA, entH 54 ttgcagattgcgttacctcaagagttgacatagtgcgcgtttgcttttaggttagcgaccGaaaatataaatgataatcat
                         -35                    -10         +1                   
TAGGTT TTGACA [HIPP]
[IMP]
[TIM]
[243]
  entSp1 622258 entS 42 ccatgataatgaaattaattatcgttatcgatcttatttggatatgttagcatgtgcagcCtaagaataggtatttaaaat
                         -35                    -10         +1                   
TAGCAT TTATCG [HIPP]
[TIM]
[244]
  entSp2 622253 entS 47 aacttccatgataatgaaattaattatcgttatcgatcttatttggatatgttagcatgtGcagcctaagaataggtattt
                        -35                     -10         +1                   
TATGTT TTATCG [HIPP]
[TIM]
[244]
  epdp 3073823 fbaA, pgk, epd 132 aatgtcttcttcggctggacaaacattccttttattccacgtttcgcttatcctagctgaAgcgtttcagtcgattaaatg
                          -35                    -10        +1                   
TATCCT TTCCTT [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[HTIM]
[RS-EPT-CBR]
[TIM]
[245]
[246]
[6]
[4]
  epdp 3073823 fbaA, pgk, epd 132 aatgtcttcttcggctggacaaacattccttttattccacgtttcgcttatcctagctgaAgcgtttcagtcgattaaatg
                          -35               -10             +1                   
TCGCTTATCCT TTCCTT [CV(RS-EPT-CBR)]
[CV(TIM)]
[HIPP]
[HTIM]
[RS-EPT-CBR]
[TIM]
[245]
[246]
[6]
[4]
  eptBp 3710581 eptB 106 tttgtgcttcatgcacactctttccccacactttttccctttgctgtggtctacttattcGcgcgtgtagattttacttat
                               -35                  -10     +1                   
TACTTA CTTTTT [TIM] [247]
[248]
  eptBp 3710581 eptB 106 tttgtgcttcatgcacactctttccccacactttttccctttgctgtggtctacttattcGcgcgtgtagattttacttat
                                               -10          +1                   
TGGTCTACT   [TIM] [247]
[248]
  esrEp 4019978 esrE 0 cagggcgatattcaggtggtgcaaaacttcgttgcgctggcagatctggcagagttcgacCctgcggaactgctggcccct
                            -35                   -10       +1                   
CAGAGT TTCGTT [TIM] [249]
[250]
  evgAp2 2483631 evgA, evgS 124 atcggtacaatccctgattttattgttgacatttcatttatgccgactatttatatggtaTacttgtcgaattatcttaaa
                                 -35                  -10   +1                   
TATGGT TTCATT [TIM] [251]
  exbBp 3152014 exbD, exbB 30 atgcaaatagtaatgagaacgactatcaattcgacgtcgttttgatattattatgcgcagAttttgtgacttgcgtcctgg
                         -35                  -10           +1                   
TATTAT ATCAAT [HIPP] [252]
  exuRp2 3246618 exuR 34 ccttctcaggcggctttttcatcactgcgagtagagctaaactcgcaaaagtggtataacAaatatagtctgccgtatcat
    [TIM] [253]
  fabAp 1016498 fabA 28 actggtttattccgaactgatcggacttgttcagcgtacacgtgttagctatcctgcgtgCttcaataaaataaggcttac
                           -35                    -10       +1                   
TATCCT TTGTTC [HIPP] [254]
  fabBp 2441641 fabB 36 ttctctattaaatggctgatcggacttgttcggcgtacaagtgtacgctattgtgcattcGaaacttactctatgtgcgac
                          -35                    -10        +1                   
TATTGT TTGTTC [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[255]
[4]
  fadBp 4031013 fadA, fadB 42 atcggcatttctttaatcttttgtttgcatatttttaacacaaaatacacacttcgactcAtctggtacgaccagatcacc
                         -35                    -10         +1                   
CACACT TTGCAT [TIM] [256]
  fadDp 1889807 sroD, fadD 61 cgcttcgcaaccttttcgttgggtaattatcaagctggtatgatgagttaatattatgttAacggcatgtatatcatttgg
                           -35                      -10     +1                   
TATTAT TTATCA [TIM] [257]
[100]
  fadIp 2460511 fadJ, fadI 42 tagctcccactttcccttttctccacttggctaaatgtaaaaaaatggttaagactatgaTcaggtcagaccactttattt
                           -35                    -10       +1                   
TAAGAC TTGGCT [AIPP] [15]
  fadRp 1234905 fadR 33 atccctttttcttctttttgtctgctatcagcgtagttagccctctggtatgatgagtccAactttgttttgctgtgttat
                      -35                        -10        +1                   
TATGAT CTGCTA [TIM] [258]
  fdnGp 1547372 fdnG, fdnH, fdnI 29 agatgttctttttgatttcgcgcaaaaagattcagaattttactgttagtttcctcgcgcAgtaatacccctgaaaaaaga
                     -35                       -10          +1                   
TAGTTT CGCAAA [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[259]
[4]
  feaBp1 1447492 feaB 27 gacaaagcgaatgtcacagcgaaaaaagtgacttttcttgtcgctgcgtacactgaaatcAcactgggtaaataataagga
                            -35                  -10        +1                   
TACACT GTGACT [TIM] [260]
[261]
[262]
  feaBp2 1447370 feaB 149 tttttattgttgcatttgtgttgcaataaacgaagctaatgagcctgactataggaaataAgtcttgtcaggcatagagac
                     -35                          -10       +1                   
TATAGG TTGCAA [TIM] [262]
  feaRp1 1447349 feaR 66 cgtgacaataaccgcttatgtctctatgcctgacaagacttatttcctatagtcaggctcAttagcttcgtttattgcaac
                              -35               -10         +1                   
TATAGT CTGACA [TIM] [262]
  feaRp2 1447309 feaR 26 tatttcctatagtcaggctcattagcttcgtttattgcaacacaaatgcaacaataaaaaTacatttcacagagcgaaaac
                                   -35            -10       +1                   
AACAAT TTGCAA [TIM] [262]
  feaRp3 1447394 feaR 111 ttcgctgtgacattcgctttgtcagctgtgacaagctccgcaaatcgtgacaataaccgcTtatgtctctatgcctgacaa
                            -35                  -10        +1                   
GACAAT GTGACA [TIM] [262]
  fecIp 4518282 fecR, fecI 47 acaacatgttaaaaatgtctattggaaacaattttatttccaattgtaatgataaccattCtcatattaatatgactacgt
                      -35                       -10         +1                   
AATGAT TTGGAA [CV(RPF)]
[CV(RPF/TIM)]
[CV(TIM)]
[HIPP]
[RPF]
[TIM]
[263]
[264]
  feoAp 3540057 feoA, feoB, feoC 106 accaacattcgcacacattttaagtattgctgatagaaaccattctcattatcattgtgtTgttgattatttaatctctcc
                           -35                    -10       +1                   
TATCAT TTGCTG [AIPP] [265]
[15]
  fepAp 612667 entD, fepA 173 ccatgtttactgtgcaatttttcattgattgcagaaatatattgataatattattgataaCtatttgcatttgcaatagcg
                         -35                     -10        +1                   
TATTAT TTGATT [TIM] [266]
[267]
  fepBp 624727 fepB 217 ggtaacgcaatctgcaactcggggttgcatctggttgtggttacaatgaaaatgagaagcAttattgatggattcgcataa
                         -35                    -10         +1                   
GAAAAT TTGCAT [HIPP]
[IMP]
[TIM]
[243]
  fepDp1 622234 fepC, fepG, fepD 45 tgccttgccatcaaatattttaaatacctattcttaggctgcacatgctaacatatccaaAtaagatcgataacgataatt
                        -35                      -10        +1                   
TAACAT ATACCT [CV(RS-EPT-CBR)]
[CV(TIM)]
[RS-EPT-CBR]
[TIM]
[4]
[268]
  fepDp2 622192 fepC, fepG, fepD 3 acatgctaacatatccaaataagatcgataacgataattaatttcattatcatggaagttCgtatgtctggttctgttgcc
                        -35                     -10         +1                   
TATCAT ATCGAT [HIPP]
[TIM]
[244]
  fesp 612687 fes, ybdZ, entF, fepE 50 cttcccacggcgcgccattacgctattgcaaatgcaaatagttatcaataatattatcaaTatatttctgcaatcaatgaa
                          -35                       -10     +1                   
TATTAT TTGCAA [TIM] [267]
  fhuAp 167442 fhuA, fhuC, fhuD, fhuB 42 tgcgtaccgcttgcgaacccgccagcgtttcgaatattatcttatctttataataatcatTctcgtttacgttatcattca
                            -35                  -10        +1                   
TATAAT TTTCGA [AIPP] [15]
  fhuFp 4605694 fhuF 31 ttatcatttgcaagccagataaatcccttgctatcgggtaaacctatcgctatgattagcAatcattatcatttagattac
                            -35                    -10      +1                   
TATGAT TTGCTA [CV(TIM)]
[HTIM]
[TIM]
[31]
[27]
  fhuFp2 4605752 fhuF 89 ttgcaacatgatttcatctctttcattgataatgataaccaatatcatatgataatttttAtcatttgcaagccagataaa
                          -35                   -10         +1                   
TATGAT TTGATA [HIPP] [269]
  fimAp 4542694 fimA, fimI, fimC, fimD, fimF, fimG,