RegulonDB RegulonDB 10.9: Gene Form
   

ampE gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

Gene      
Name: ampE    Texpresso search in the literature
Synonym(s): ECK0110, EG10042, b0111
Genome position(nucleotides): 119281 --> 120135 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
52.05
External database links:  
ASAP:
ABE-0000382
CGSC:
30481
ECHOBASE:
EB0040
ECOLIHUB:
ampE
OU-MICROARRAY:
b0111
STRING:
511145.b0111
COLOMBOS: ampE


Product      
Name: protein AmpE
Synonym(s): AmpE
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 32.122
Isoelectric point: 10.058
Motif(s):
 
Type Positions Sequence
44 -> 60 LGMTIIAMGVTFLLLRA
184 -> 198 RLQSGIDAVLHVLDW
261 -> 264 SMAK
74 -> 87 WLLIGLLCIGAGKV
1 -> 284 MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTLGMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRNDSHARATMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGTWGPVTLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKALPAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIALLTIYGALV

 

Classification:
Multifun Terms (GenProtEC)  
  5 - cell processes --> 5.6 - protection --> 5.6.4 - drug resistance/sensitivity
  6 - cell structure --> 6.1 - membrane
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0005887 - integral component of plasma membrane
GO:0016021 - integral component of membrane
biological_process GO:0046677 - response to antibiotic
Note(s): Note(s): ...[more].
External database links:  
DIP:
DIP-47964N
ECOCYC:
EG10042-MONOMER
ECOLIWIKI:
b0111
INTERPRO:
IPR031347
PFAM:
PF17113
PRIDE:
P0AE14
PRODB:
PRO_000022097
REFSEQ:
NP_414653
UNIPROT:
P0AE14


Operon      
Name: ampDE         
Operon arrangement:
Transcription unit        Promoter
ampDE


Transcriptional Regulation      
Display Regulation             
Repressed by: CRP


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter TSS_232 118078 reverse nd [RS-EPT-CBR] [1]
  promoter ampDp5 118681 forward Similarity to the consensus
Read more >
[ICWHO] [2]
  promoter TSS_233 120916 reverse nd [RS-EPT-CBR] [1]
  promoter TSS_234 (cluster) 120919 reverse For this promoter, there
Read more >
[RS-EPT-CBR] [1]
  promoter TSS_235 120955 reverse nd [RS-EPT-CBR] [1]



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