RegulonDB RegulonDB 11.1: Gene Form
   

cynS gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

cynX cynT cynS

Gene      
Name: cynS    Texpresso search in the literature
Synonym(s): ECK0337, EG10175, b0340, cnt, cyaN
Genome position(nucleotides): 359489 --> 359959
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 50.53
External database links:  
ASAP:
 ABE-0001173
CGSC:
 15267
ECHOBASE:
 EB0172
ECOLIHUB:
 cynS
OU-MICROARRAY:
 b0340
STRING:
 511145.b0340
COLOMBOS: cynS


Product      
Name: cyanase
Synonym(s): Cnt, CyaN, CynS
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 17.049
Isoelectric point: 4.774
Motif(s):
 
Type Positions Sequence Comment
34 -> 34 D UniProt: In Ref. 3..
68 -> 68 D UniProt: In Ref. 3..
74 -> 74 L UniProt: In Ref. 3..
88 -> 153 IPTDPTMYRFYEMLQVYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDGKYLPT
125 -> 125 N UniProt: In Ref. 3..

 
Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.7 - central intermediary metabolism --> 1.7.24 - cyanate catabolism
  1 - metabolism --> 1.8 - metabolism of other compounds --> 1.8.3 - nitrogen metabolism
  5 - cell processes --> 5.6 - protection --> 5.6.2 - detoxification
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
molecular_function GO:0003677 - DNA binding
GO:0016829 - lyase activity
GO:0008824 - cyanate hydratase activity
biological_process GO:0009439 - cyanate metabolic process
GO:0009440 - cyanate catabolic process
Note(s): Note(s): ...[more].
External database links:  
ALPHAFOLD:
 P00816
DIP:
 DIP-9365N
ECOCYC:
 CYANLY-MONOMER
ECOLIWIKI:
 b0340
INTERPRO:
 IPR008076
INTERPRO:
 IPR003712
INTERPRO:
 IPR010982
INTERPRO:
 IPR036581
MODBASE:
 P00816
PANTHER:
 PTHR34186
PDB:
 2IVQ
PDB:
 2IVG
PDB:
 2IVB
PDB:
 2IV1
PDB:
 2IUO
PDB:
 2IU7
PDB:
 1DW9
PDB:
 1DWK
PFAM:
 PF02560
PRIDE:
 P00816
PRINTS:
 PR01693
PRODB:
 PRO_000022366
REFSEQ:
 NP_414874
SMART:
 SM01116
SMR:
 P00816
UNIPROT:
 P00816


Operon      
Name: cynTSX         
Operon arrangement:
Transcription unit        Promoter
cynTS
cynTSX


Transcriptional Regulation      
Display Regulation             
Activated by: CynR


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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