RegulonDB RegulonDB 10.9: Gene Form
   

nlpA gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

Gene      
Name: nlpA    Texpresso search in the literature
Synonym(s): ECK3651, EG10657, b3661
Genome position(nucleotides): 3839175 <-- 3839993 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
47.37
External database links:  
ASAP:
ABE-0011964
CGSC:
35704
ECHOBASE:
EB0651
ECOLIHUB:
nlpA
OU-MICROARRAY:
b3661
STRING:
511145.b3661
COLOMBOS: nlpA


Product      
Name: lipoprotein-28
Synonym(s): NlpA
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 29.424
Isoelectric point: 6.097
Motif(s):
 
Type Positions Sequence
1 -> 23 MKLTTHHLRTGAALLLAGILLAG
34 -> 272 IKVGVINGAEQDVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGYKLVAVGNTFVFPMAGYSKKIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLLPTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDSVFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETIFNGGAVPGW
24 -> 272 CDQSSSDAKHIKVGVINGAEQDVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGYKLVAVGNTFVFPMAGYSKKIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLLPTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDSVFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETIFNGGAVPGW

 

Classification:
Multifun Terms (GenProtEC)  
  4 - transport
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
biological_process GO:0015821 - methionine transport
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
EG10657-MONOMER
ECOLIWIKI:
b3661
INTERPRO:
IPR004872
MODBASE:
P04846
PANTHER:
PTHR30429
PFAM:
PF03180
PRIDE:
P04846
PRODB:
PRO_000023392
PROSITE:
PS51257
REFSEQ:
NP_418117
SMR:
P04846
UNIPROT:
P04846


Operon      
Name: nlpA         
Operon arrangement:
Transcription unit        Promoter
nlpA


Transcriptional Regulation      
Display Regulation             
Activated by: CsgD


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter TSS_4246 3838644 forward nd [RS-EPT-CBR] [1]
  promoter TSS_4247 3840008 reverse nd [RS-EPT-CBR] [1]



RegulonDB