RegulonDB RegulonDB 10.9: Gene Form
   

tdcC gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

tdcC tdcB tdcD nc4

Gene      
Name: tdcC    Texpresso search in the literature
Synonym(s): ECK3105, EG10991, b3116
Genome position(nucleotides): 3263686 <-- 3265017 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 49.85
External database links:  
ASAP:
 ABE-0010247
CGSC:
 29709
ECHOBASE:
 EB0984
ECOLIHUB:
 tdcC
OU-MICROARRAY:
 b3116
STRING:
 511145.b3116
COLOMBOS: tdcC


Product      
Name: threonine/serine:H+ symporter
Synonym(s): TdcC, threonine/serine STP transporter
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 48.879
Isoelectric point: 9.209
Motif(s):
 
Type Positions Sequence
163 -> 183 VMSYLVWPFIASLVLISLSLI
261 -> 281 MLMVAVVMFFAFSCLFTLSPA
311 -> 331 FAITLEYAASIIALVAIFKSF
389 -> 409 IEAMGAPIIASLLCLLPMYAI
70 -> 70 L

 
Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.5 - biosynthesis of building blocks --> 1.5.1 - amino acids --> 1.5.1.8 - threonine
  4 - transport --> 4.2 - Electrochemical potential driven transporters --> 4.2.A - Porters (Uni-, Sym- and Antiporters)
  6 - cell structure --> 6.1 - membrane
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0005887 - integral component of plasma membrane
GO:0016021 - integral component of membrane
molecular_function GO:0015293 - symporter activity
GO:0015295 - solute:proton symporter activity
GO:0015171 - amino acid transmembrane transporter activity
GO:0015194 - L-serine transmembrane transporter activity
GO:0015195 - L-threonine transmembrane transporter activity
GO:0022889 - serine transmembrane transporter activity
GO:0015565 - threonine efflux transmembrane transporter activity
biological_process GO:0006865 - amino acid transport
GO:0032329 - serine transport
GO:0003333 - amino acid transmembrane transport
GO:0015825 - L-serine transport
GO:0015826 - threonine transport
GO:1902600 - proton transmembrane transport
Note(s): Note(s): ...[more].
External database links:  
DIP:
 DIP-48056N
ECOCYC:
 TDCC-MONOMER
ECOLIWIKI:
 b3116
INTERPRO:
 IPR018227
INTERPRO:
 IPR004694
INTERPRO:
 IPR023726
PANTHER:
 PTHR35334:SF1
PFAM:
 PF03222
PRIDE:
 P0AAD8
PRODB:
 PRO_000024039
REFSEQ:
 NP_417586
UNIPROT:
 P0AAD8


Operon      
Name: tdcABCDEFG         
Operon arrangement:
Transcription unit        Promoter
tdcABCDEFG
tdcBCDEFG


Transcriptional Regulation      
Display Regulation             
Activated by: CRP, TdcA, TdcR, FNR, IHF


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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