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|
| Gene |  |
|
|---|---|---|
| Name: | ychA  |
|
| Synonym(s): | ECK1202, EG11251, b1214, sirB1 | |
| Genome position(nucleotides): | 1267320 --> 1268129 Genome Browser | |
| Strand: | forward | |
| Sequence: | Get nucleotide sequence FastaFormat | |
GC content %: |
46.42 | |
| External database links: | ||
ASAP: |
ABE-0004074 | |
ECHOBASE: |
EB1231 | |
ECOLIHUB: |
ychA | |
OU-MICROARRAY: |
b1214 | |
STRING: |
511145.b1214 | |
| COLOMBOS: | ychA |
| Product | |
|||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Name: | transglutaminase-like/TPR repeat-containing protein | |||||||||
| Synonym(s): | YchA | |||||||||
| Sequence: | Get amino acid sequence Fasta Format | |||||||||
| Cellular location: | cytosol | |||||||||
| Molecular weight: | 30.841 | |||||||||
| Isoelectric point: | 4.202 | |||||||||
| Motif(s): | ||||||||||
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| Classification: |
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| Note(s): | Note(s): ...[more]. | |||||||||
| External database links: | ||||||||||
DIP: |
DIP-35939N | |||||||||
ECOCYC: |
EG11251-MONOMER | |||||||||
ECOLIWIKI: |
b1214 | |||||||||
INTERPRO: |
IPR032698 | |||||||||
PFAM: |
PF13369 | |||||||||
PFAM: |
PF13371 | |||||||||
PRIDE: |
P0AGM5 | |||||||||
PRODB: |
PRO_000023950 | |||||||||
REFSEQ: |
NP_415732 | |||||||||
SMR: |
P0AGM5 | |||||||||
UNIPROT: |
P0AGM5 | |||||||||
| Elements in the selected gene context region unrelated to any object in RegulonDB | |
|---|
| Type | Name | Post Left | Post Right | Strand | Notes | Evidence (Confirmed, Strong, Weak) | References | |
|---|---|---|---|---|---|---|---|---|
| promoter | TSS_1547 (cluster) | 1267181 | forward | nd | [RS-EPT-CBR] | [1] | ||
| promoter | TSS_1548 | 1267190 | forward | nd | [RS-EPT-CBR] | [1] |
[RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates