RegulonDB RegulonDB 11.0: Gene Form
   

appC gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

appC appB hyaF hyaE YdeO appCp2 appCp2 appCp appCp

Gene      
Name: appC    Texpresso search in the literature
Synonym(s): ECK0969, EG11380, b0978, cbdA, cyxA
Genome position(nucleotides): 1037740 --> 1039284
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 54.05
External database links:  
ASAP:
 ABE-0003300
CGSC:
 31810
ECHOBASE:
 EB1354
ECOLIHUB:
 appC
OU-MICROARRAY:
 b0978
STRING:
 511145.b0978
COLOMBOS: appC


Product      
Name: cytochrome bd-II subunit 1
Synonym(s): AppC, CbdA, CyxA
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 57.92
Isoelectric point: 7.38
Motif(s):
 
Type Positions Sequence Comment
7 -> 501 LSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGP
23 -> 42 VPLTLGLIFLLAIMETIYVV UniProt: Helical.
95 -> 114 PLAMEALMAFFLESTFVGLF UniProt: Helical.
130 -> 149 TWLVAFGSNLSALWILNANG UniProt: Helical.
188 -> 207 VMAGYVTGAMFIMAISAWYL UniProt: Helical.

 
Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.4 - energy production/transport --> 1.4.2 - electron acceptors
  6 - cell structure --> 6.1 - membrane
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0005887 - integral component of plasma membrane
GO:0016021 - integral component of membrane
GO:0070069 - cytochrome complex
molecular_function GO:0009055 - electron transfer activity
GO:0046872 - metal ion binding
GO:0009486 - cytochrome bo3 ubiquinol oxidase activity
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
GO:0020037 - heme binding
biological_process GO:0006119 - oxidative phosphorylation
GO:0019646 - aerobic electron transport chain
Note(s): Note(s): ...[more].
External database links:  
ALPHAFOLD:
 P26459
DIP:
 DIP-9119N
ECOCYC:
 APPC-MONOMER
ECOLIWIKI:
 b0978
ECOO157CYC:
 APPC-MONOMER
INTERPRO:
 IPR002585
PANTHER:
 PTHR30365
PFAM:
 PF01654
PRIDE:
 P26459
PRODB:
 PRO_000022111
REFSEQ:
 NP_415497
UNIPROT:
 P26459


Operon      
Name: appCBXA         
Operon arrangement:
Transcription unit        Promoter
appCBA-yccB
appCBA-yccB
appA


Transcriptional Regulation      
Display Regulation             
Activated by: ArcA, YdeO, AppY


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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