RegulonDB RegulonDB 10.10: Gene Form
   

nupX gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

nupX yeiI rihB Lrp IHF IHF

Gene      
Name: nupX    Texpresso search in the literature
Synonym(s): ECK2154, EG12029, b2161, yeiJ
Genome position(nucleotides): 2252895 <-- 2254145 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 50.44
External database links:  
ASAP:
 ABE-0007152
ECHOBASE:
 EB1964
ECOLIHUB:
 nupX
OU-MICROARRAY:
 b2161
STRING:
 511145.b2161
COLOMBOS: nupX


Product      
Name: putative nucleoside transporter
Synonym(s): NupX, YeiJ
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 43.41
Isoelectric point: 8.99
Motif(s):
 
Type Positions Sequence
395 -> 415 LAAATLSNLMSATIAGFFIGL
32 -> 52 VGAALVLQVVIGGIMLWLPPG
353 -> 373 VAIISFALCGFANFGSIGVVV
3 -> 23 VMRSVLGMVVLLTIAFLLSVN
173 -> 193 LFTAICSGMASIAGSTMIGYA

 
Classification:
Multifun Terms (GenProtEC)  
  4 - transport --> 4.2 - Electrochemical potential driven transporters --> 4.2.A - Porters (Uni-, Sym- and Antiporters)
  6 - cell structure --> 6.1 - membrane
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0005887 - integral component of plasma membrane
GO:0016021 - integral component of membrane
molecular_function GO:0015293 - symporter activity
GO:0005337 - nucleoside transmembrane transporter activity
biological_process GO:1901642 - nucleoside transmembrane transport
Note(s): Note(s): ...[more].
External database links:  
DIP:
 DIP-11922N
ECOCYC:
 YEIJ-MONOMER
ECOLIWIKI:
 b2161
INTERPRO:
 IPR002668
INTERPRO:
 IPR008276
INTERPRO:
 IPR011657
INTERPRO:
 IPR018270
PANTHER:
 PTHR10590
PFAM:
 PF01773
PFAM:
 PF07662
PRIDE:
 P33021
PRODB:
 PRO_000023444
REFSEQ:
 NP_416666
SMR:
 P33021
UNIPROT:
 P33021


Operon      
Name: nupX         
Operon arrangement:
Transcription unit        Promoter
nupX


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



RegulonDB