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Gene | ![]() ![]() |
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Name: | lrhA ![]() |
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Synonym(s): | ECK2283, EG12123, b2289, genR | |
Genome position(nucleotides): | 2405703 <-- 2406641 Genome Browser | |
Strand: | reverse | |
Sequence: | Get nucleotide sequence FastaFormat | |
GC content %: |
49.73 | |
External database links: | ||
ASAP: |
ABE-0007555 | |
CGSC: |
32685 | |
ECHOBASE: |
EB2044 | |
ECOLIHUB: |
lrhA | |
OU-MICROARRAY: |
b2289 | |
STRING: |
511145.b2289 | |
COLOMBOS: | lrhA |
Product | ![]() ![]() |
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Name: | DNA-binding transcriptional dual regulator LrhA | ||||||||||||||||||
Synonym(s): | GenR, LrhA | ||||||||||||||||||
Sequence: | Get amino acid sequence Fasta Format | ||||||||||||||||||
Regulator Family: | LysR | ||||||||||||||||||
Cellular location: | cytosol | ||||||||||||||||||
Molecular weight: | 34.594 | ||||||||||||||||||
Isoelectric point: | 5.029 | ||||||||||||||||||
Motif(s): | |||||||||||||||||||
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Classification: |
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Note(s): | Note(s): ...[more]. | ||||||||||||||||||
Evidence: | [APPH] Assay of protein purified to homogeneity [GEA] Gene expression analysis [HIFS] Human inference of function from sequence |
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Reference(s): |
[1] Bongaerts J., et al., 1995 [2] Gibson KE., et al., 1999 [3] Lehnen D., et al., 2002 |
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External database links: | |||||||||||||||||||
ECOCYC: |
EG12123-MONOMER | ||||||||||||||||||
ECOLIWIKI: |
b2289 | ||||||||||||||||||
INTERPRO: |
IPR036390 | ||||||||||||||||||
INTERPRO: |
IPR036388 | ||||||||||||||||||
INTERPRO: |
IPR005119 | ||||||||||||||||||
INTERPRO: |
IPR000847 | ||||||||||||||||||
MODBASE: |
P36771 | ||||||||||||||||||
PFAM: |
PF00126 | ||||||||||||||||||
PFAM: |
PF03466 | ||||||||||||||||||
PRIDE: |
P36771 | ||||||||||||||||||
PRINTS: |
PR00039 | ||||||||||||||||||
PROSITE: |
PS50931 | ||||||||||||||||||
REFSEQ: |
NP_416792 | ||||||||||||||||||
SMR: |
P36771 | ||||||||||||||||||
UNIPROT: |
P36771 | ||||||||||||||||||
RNA cis-regulatory element | ![]() |
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Attenuation: | Transcriptional |
Elements in the selected gene context region unrelated to any object in RegulonDB | ![]() ![]() |
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Type | Name | Post Left | Post Right | Strand | Notes | Evidence (Confirmed, Strong, Weak) | References | |
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promoter | TSS_2564 | 2404729 | reverse | nd | [RS-EPT-CBR] | [4] | ||
promoter | TSS_2565 | 2405136 | reverse | nd | [RS-EPT-CBR] | [4] | ||
promoter | TSS_2566 (cluster) | 2405828 | reverse | nd | [RS-EPT-CBR] | [4] | ||
promoter | TSS_2567 (cluster) | 2406635 | reverse | nd | [RS-EPT-CBR] | [4] | ||
promoter | TSS_2568 | 2406641 | reverse | nd | [RS-EPT-CBR] | [4] | ||
promoter | TSS_2569 | 2407012 | reverse | nd | [RS-EPT-CBR] | [4] | ||
promoter | alaAp7 | 2407414 | forward | nd | [ICWHO] | [5] |
Reference(s) |
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