RegulonDB RegulonDB 10.10: Gene Form
   

yiaO gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

lyxK yiaN yiaO sgbH

Gene      
Name: yiaO    Texpresso search in the literature
Synonym(s): ECK3568, EG12283, b3579
Genome position(nucleotides): 3746094 --> 3747080 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 51.17
External database links:  
ASAP:
 ABE-0011694
ECHOBASE:
 EB2191
ECOLIHUB:
 yiaO
OU-MICROARRAY:
 b3579
STRING:
 511145.b3579
COLOMBOS: yiaO


Product      
Name: 2,3-diketo-L-gulonate:Na+ symporter - periplasmic binding protein
Synonym(s): YiaO
Sequence: Get amino acid sequence Fasta Format
Cellular location: periplasmic space
Molecular weight: 35.97
Isoelectric point: 7.19
Motif(s):
 
Type Positions Sequence
1 -> 24 MKLRSVTYALFIAGLAAFSTSSLA
30 -> 312 FGYETSQTDSQHIAAKKFNDLLQERTKGELKLKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFAGLSPVMNLLDVPFLFRDTAHAHKTLDGKVGDDLKASLEGKGLKVLAYWENGWRDVTNSRAPVKTPADLKGLKIRTNNSPMNIAAFKVFGANPIPMPFAEVYTGLETRTIDAQEHPINVVWSAKFFEVQKFLSLTHHAYSPLLVVINKAKFDGLSPEFQQALVSSAQEAGNYQRKLVAEDQQKIIDGMKEAGVEVITDLDRKAFSDALGNQVRDMFVK
25 -> 328 AQSLRFGYETSQTDSQHIAAKKFNDLLQERTKGELKLKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFAGLSPVMNLLDVPFLFRDTAHAHKTLDGKVGDDLKASLEGKGLKVLAYWENGWRDVTNSRAPVKTPADLKGLKIRTNNSPMNIAAFKVFGANPIPMPFAEVYTGLETRTIDAQEHPINVVWSAKFFEVQKFLSLTHHAYSPLLVVINKAKFDGLSPEFQQALVSSAQEAGNYQRKLVAEDQQKIIDGMKEAGVEVITDLDRKAFSDALGNQVRDMFVKDVPQGADLLKAVDEVQ

 
Classification:
Multifun Terms (GenProtEC)  
  4 - transport --> 4.2 - Electrochemical potential driven transporters --> 4.2.A - Porters (Uni-, Sym- and Antiporters)
Gene Ontology Terms (GO)  
cellular_component GO:0030288 - outer membrane-bounded periplasmic space
GO:0042597 - periplasmic space
molecular_function GO:0030246 - carbohydrate binding
biological_process GO:0006974 - cellular response to DNA damage stimulus
GO:0008643 - carbohydrate transport
GO:0055085 - transmembrane transport
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
 EG12283-MONOMER
ECOLIWIKI:
 b3579
INTERPRO:
 IPR038404
INTERPRO:
 IPR018389
INTERPRO:
 IPR004682
PANTHER:
 PTHR33376
PFAM:
 PF03480
PRIDE:
 P37676
REFSEQ:
 NP_418036
SMR:
 P37676
UNIPROT:
 P37676


Operon      
Name: yiaKLMNO-lyxK-sgbHUE         
Operon arrangement:
Transcription unit        Promoter
yiaKLMNO-lyx-sgbHUE
yiaKLMNO-lyx-sgbHUE


Transcriptional Regulation      
Display Regulation             
Activated by: CRP, IHF
Repressed by: PlaR
Undetermined regulation CRP


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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