RegulonDB

Gene
Name:	gntT
Synonym(s):	ECK3402, EG12380, b3415, gntM, gntTalpha, usgA, yhgC
Genome position(nucleotides):	3546559 --> 3547875
Strand:	forward
Sequence:	Get nucleotide sequence FastaFormat
GC content %:	53.38
External database links:

ASAP:	ABE-0011148
CGSC:	668
ECHOBASE:	EB2282
ECOLIHUB:	gntT
OU-MICROARRAY:	b3415
STRING:	511145.b3415
COLOMBOS:	gntT

Shine dalgarno
Sequence:	acaaatgaaaGGCCAGgtaaatcATG

Product

Name:

high-affinity gluconate transporter

Synonym(s):

GntM, GntT, UsgA, YhgC

Sequence:

Get amino acid sequence Fasta Format

Cellular location:

inner membrane

Molecular weight:

45.967

Isoelectric point:

8.448

Motif(s):

Type	Positions	Sequence	Comment
	1 -> 437	MPLVIVAIGVILLLLLMIRFKMNGFIALVLVALAVGLMQGMPLDKVIGSIKAGVGGTLGSLALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQWAVVLTGFTVGFALFYEVGFVLMLPLVFTIAASANIPLLYVGVPMAAALSVTHGFLPPHPGPTAIATIFNADMGKTLLYGTILAIPTVILAGPVYARVLKGIDKPIPEGLYSAKTFSEEEMPSFGVSVWTSLVPVVLMAMRAIAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFTFGLNRGRSMDQINDTLVSSIKIIAMMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNISPLLMAWSIAAVLRIALGSATVAAITAGGIAAPLIATTGVSPELMVIAVGSGSVIFSHVNDPGFWLFKEYFNLTIGETIKSWSMLETIISVCGLVGCLLLNMV
	2 -> 22	PLVIVAIGVILLLLLMIRFKM	UniProt: Helical.
	23 -> 43	NGFIALVLVALAVGLMQGMPL	UniProt: Helical.
	52 -> 72	AGVGGTLGSLALIMGFGAMLG	UniProt: Helical.
	55 -> 58	GGTL	UniProt: In Ref. 1; AAA58213..

Classification:

Multifun Terms (GenProtEC)
		4 - transport --> 4.2 - Electrochemical potential driven transporters --> 4.2.A - Porters (Uni-, Sym- and Antiporters)
		6 - cell structure --> 6.1 - membrane
Gene Ontology Terms (GO)
	cellular_component	GO:0016020 - membrane GO:0005886 - plasma membrane GO:0005887 - integral component of plasma membrane GO:0016021 - integral component of membrane
	molecular_function	GO:0015128 - gluconate transmembrane transporter activity
	biological_process	GO:0008643 - carbohydrate transport GO:0019521 - D-gluconate metabolic process GO:0046177 - D-gluconate catabolic process GO:0035429 - gluconate transmembrane transport

Note(s):

Note(s): ...[more].

External database links:

ALPHAFOLD:

ECOCYC:

ECOLIWIKI:

INTERPRO:

PANTHER:

PFAM:

PRIDE:

REFSEQ:

UNIPROT:

Operon

Name:

gntT

Operon arrangement:

Transcription unit	Promoter
gntT	gntTp1
gntT	gntTp2
gntT	gntTp3

Transcriptional Regulation
	Display Regulation
Activated by:	CRP
Repressed by:	GntR

Elements in the selected gene context region unrelated to any object in RegulonDB

	Type	Name	Post Left	Post Right	Strand	Notes	Evidence (Confirmed, Strong, Weak)	References
	promoter	TSS_4013	3547786		forward	nd	[RS-EPT-CBR]	[1]

Evidence
[RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates

Reference(s)
[1] Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muñiz-Rascado L, García-Sotelo JS, Weiss V, Solano-Lira H, Martínez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernández S, Alquicira-Hernández K, López-Fuentes A, Porrón-Sotelo L, Huerta AM, Bonavides-Martínez C, Balderas-Martínez YI, Pannier L, Olvera M, Labastida A, Jiménez-Jacinto V, Vega-Alvarado L, Del Moral-Chávez V, Hernández-Alvarez A, Morett E, Collado-Vides J., 2012, RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more., Nucleic Acids Res.

Reference(s)

[1] Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muñiz-Rascado L, García-Sotelo JS, Weiss V, Solano-Lira H, Martínez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernández S, Alquicira-Hernández K, López-Fuentes A, Porrón-Sotelo L, Huerta AM, Bonavides-Martínez C, Balderas-Martínez YI, Pannier L, Olvera M, Labastida A, Jiménez-Jacinto V, Vega-Alvarado L, Del Moral-Chávez V, Hernández-Alvarez A, Morett E, Collado-Vides J., 2012, RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more., Nucleic Acids Res.