RegulonDB RegulonDB 10.9: Gene Form
   

tpke70 gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

Gene      
Name: tpke70    Texpresso search in the literature
Synonym(s): G0-8906
Type: Phantom Gene
Genome position(nucleotides): 2496194 <-- 2496629 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
49.77
Note(s): Tpke70 is a candiate small RNA locus of approximately 435 nt; Northern blot experiments identified an RNA of 40 nt Rivas E,2001.
Likely functional regions of Tpke70 were identified within the entire 435 nt region; of the predicted mRNA targets, testing by electrophoretic mobility shift assay confirmed an interaction with the mcrA, torT, glnK, and agaS mRNAs Mihailovic MK,2018.
Review: 12654996
External database links:  
ECOLIHUB:
tpke70
COLOMBOS: tpke70


Operon      
Name: tpke70         
Operon arrangement:
Transcription unit        Promoter
tpke70


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter yfdYp5 2495333 reverse Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter yfdYp6 2495336 reverse Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter TSS_2670 2495493 forward nd [RS-EPT-CBR] [2]



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