RegulonDB RegulonDB 11.1: Gene Form
   

ykfJ gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

pepD prfH yafP ykfJ

Gene      
Name: ykfJ    Texpresso search in the literature
Synonym(s): ECK0236, G6119, b0235
Type: Pseudo Gene
Genome position(nucleotides): 253467 --> 253733
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 52.06
External database links:  
ASAP:
 ABE-0000805
ECHOBASE:
 EB4112
ECOLIHUB:
 ykfJ
OU-MICROARRAY:
 b0235
STRING:
 316407.85674390
COLOMBOS: ykfJ


Product      
Name: RNA ligase superfamily protein YkfJ
Sequence: Get amino acid sequence Fasta Format
Isoelectric point: 10.043
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
Note(s): Note(s): ...[more].
External database links:  
ALPHAFOLD:
 P75675
DIP:
 DIP-48205N
ECOCYC:
 G6119-MONOMER
ECOLIWIKI:
 b0235
INTERPRO:
 IPR036025
MODBASE:
 P75675
PANTHER:
 PTHR11118
PRIDE:
 P75675
REFSEQ:
 NP_414770
SMR:
 P75675
UNIPROT:
 P75675


Operon      
Name: ykfJ-prfH         
Operon arrangement:
Transcription unit        Promoter
ykfJ-prfH


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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