RegulonDB RegulonDB 11.1: Gene Form
   

yafZ gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

ykfA yafZ yafY ykfL ykfK anti-anti-terminator anti-terminator terminator anti-anti-terminator anti-terminator terminator yafZp yafZp ykfBp2 ykfBp2 ykfBp1 ykfBp1

Gene      
Name: yafZ    Texpresso search in the literature
Synonym(s): ECK0254, G6127, b0252
Genome position(nucleotides): 267184 <-- 268005
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 57.79
External database links:  
ASAP:
 ABE-0000856
ECHOBASE:
 EB3122
ECOLIHUB:
 yafZ
OU-MICROARRAY:
 b0252
STRING:
 511145.b0252
COLOMBOS: yafZ


Product      
Name: CP4-6 prophage; DUF932 domain-containing protein YafZ
Synonym(s): YafZ
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 31.051
Isoelectric point: 9.663
Motif(s):
 
Type Positions Sequence Comment
37 -> 262 KHESRSERYTYIPTISLLDSLQREGFQPFFACQTRVRDPGRREHTKHMLRLRREGQITGKQVPEIILLNSHDGTSSYQMLPGLFRAVCQNGLVCGESFGEVRVPHKGDVVSQVIEGAYEVLGIFDRVEEKRDAMQSLLLPPPAQQALAKAALTYRFGEDHQPVTESQILSPRRWQDESNDLWTTYQRIQENLIKGGLSGRNAKGGRSHTRAVRGIDGDVKLNRALW

 
Classification:
Multifun Terms (GenProtEC)  
  8 - extrachromosomal --> 8.1 - prophage genes and phage related functions
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
Note(s): Note(s): ...[more].
External database links:  
ALPHAFOLD:
 P77206
DIP:
 DIP-11229N
ECOCYC:
 G6127-MONOMER
ECOLIWIKI:
 b0252
INTERPRO:
 IPR026325
PFAM:
 PF06067
PRIDE:
 P77206
REFSEQ:
 NP_414786
UNIPROT:
 P77206


Operon      
Name: ykfA-yafZ         
Operon arrangement:
Transcription unit        Promoter
yafZ
ykfA-yafZ


RNA cis-regulatory element    
Attenuation: Transcriptional


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



RegulonDB