RegulonDB RegulonDB 11.1: Gene Form
   

lysY gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

valZ lysY lysZ Cis-reg Cis-reg

Gene      
Name: lysY    Texpresso search in the literature
Synonym(s): ECK0736, G6390, b0747, lysTg, lysTgamma
Genome position(nucleotides): 781147 --> 781222
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 50.0
External database links:  
ASAP:
 ABE-0002533
ECHOBASE:
 EB4286
ECOLIHUB:
 lysY
OU-MICROARRAY:
 b0747
COLOMBOS: lysY


Product      
Name: tRNA-Lys(UUU)
Synonym(s): tRNAlysY
Type: tRNAs
Cellular location: cytosol
Classification:
Multifun Terms (GenProtEC)  
  2 - information transfer --> 2.2 - RNA related --> 2.2.5 - tRNA
Gene Ontology Terms (GO)  
cellular_component GO:0005737 - cytoplasm
GO:0005829 - cytosol
molecular_function GO:0030533 - triplet codon-amino acid adaptor activity
Note(s): Note(s): ...[more].
Evidence: [AS-TAS] Traceable author statement
Reference(s): [1] Murphy FV., et al., 2004
[2] Siekevitz P., et al., 1981
External database links:  
ECOCYC:
 RNA0-301
ECOLIWIKI:
 b0747


Operon      
Name: valZ-lysY         
Operon arrangement:
Transcription unit        Promoter
valZ-lysY


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Murphy FV., Ramakrishnan V., Malkiewicz A., Agris PF., 2004, The role of modifications in codon discrimination by tRNA(Lys)UUU., Nat Struct Mol Biol 11(12):1186-91

 [2] Siekevitz P., Zamecnik PC., 1981, Ribosomes and protein synthesis., J Cell Biol 91(3 Pt 2):53s-65s

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