RegulonDB RegulonDB 10.9: Gene Form
   

ymgA gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

ymgA ariR ycgZ

Gene      
Name: ymgA    Texpresso search in the literature
Synonym(s): ECK1152, G6605, b1165
Genome position(nucleotides): 1216068 --> 1216340 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
37.0
External database links:  
ASAP:
ABE-0003909
ECHOBASE:
EB4037
ECOLIHUB:
ymgA
OU-MICROARRAY:
b1165
STRING:
511145.b1165
COLOMBOS: ymgA


Product      
Name: putative two-component system connector protein YmgA
Synonym(s): YmgA, protein involved in biofilm formation
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 10.345
Isoelectric point: 10.613
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
molecular_function GO:0005515 - protein binding
biological_process GO:1900191 - negative regulation of single-species biofilm formation
Note(s): Note(s): ...[more].
Reference(s): [1] Duval V., et al., 2017
External database links:  
ECOCYC:
G6605-MONOMER
ECOLIWIKI:
b1165
PRIDE:
P75992
REFSEQ:
NP_415683
UNIPROT:
P75992


Operon      
Name: ycgZ-ymgA-ariR-ymgC         
Operon arrangement:
Transcription unit        Promoter
ycgZ-ymgA-ariR-ymgC
ycgZ-ymgA-ariR-ymgC
ariR
ycgZ
ymgA-ariR
ymgC


Transcriptional Regulation      
Display Regulation             
Activated by: MarA
Repressed by: BluR


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Duval V., Foster K., Brewster J., Levy SB., 2017, A Novel Regulatory Cascade Involving BluR, YcgZ, and Lon Controls the Expression of Escherichia coli OmpF Porin., Front Microbiol 8:1148


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