RegulonDB RegulonDB 11.1: Gene Form
   

ynaE gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

pinR ynaE ynaM pinRp1 pinRp1

Gene      
Name: ynaE    Texpresso search in the literature
Synonym(s): ECK1370, G6698, b1375
Genome position(nucleotides): 1433991 <-- 1434224
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 35.9
External database links:  
ASAP:
 ABE-0004602
ECHOBASE:
 EB3155
ECOLIHUB:
 ynaE
OU-MICROARRAY:
 b1375
STRING:
 511145.b1375
COLOMBOS: ynaE


Product      
Name: Rac prophage; uncharacterized protein YnaE
Synonym(s): Rac prophage; cold shock protein YnaE, YnaE
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 8.751
Isoelectric point: 10.101
Classification:
Multifun Terms (GenProtEC)  
  8 - extrachromosomal --> 8.1 - prophage genes and phage related functions
Gene Ontology Terms (GO)  
biological_process GO:0009409 - response to cold
Note(s): Note(s): ...[more].
External database links:  
ALPHAFOLD:
 P76073
ECOCYC:
 G6698-MONOMER
ECOLIWIKI:
 b1375
PRIDE:
 P76073
REFSEQ:
 NP_415893
UNIPROT:
 P76073


Operon      
Name: ynaE         
Operon arrangement:
Transcription unit        Promoter
ynaE


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter pinRp1 1433712 reverse nd [COMP-AINF] [1]


Evidence    

 [COMP-AINF] Inferred computationally without human oversight


Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78

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