RegulonDB RegulonDB 11.1: Gene Form
   

ydhT gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

ydhS ydhT ydhU ydhX ydhTp1 ydhTp1

Gene      
Name: ydhT    Texpresso search in the literature
Synonym(s): ECK1665, G6897, b1669
Genome position(nucleotides): 1748747 <-- 1749559
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 52.89
External database links:  
ASAP:
 ABE-0005577
ECHOBASE:
 EB3712
ECOLIHUB:
 ydhT
OU-MICROARRAY:
 b1669
STRING:
 511145.b1669
COLOMBOS: ydhT


Product      
Name: uncharacterized protein YdhT
Synonym(s): YdhT
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 29.341
Isoelectric point: 6.664
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
Note(s): Note(s): ...[more].
Reference(s): [1] Awad A Al Ibrahim N., et al., 2017
External database links:  
ALPHAFOLD:
 P77147
DIP:
 DIP-11739N
ECOCYC:
 G6897-MONOMER
ECOLIWIKI:
 b1669
PRIDE:
 P77147
REFSEQ:
 NP_416184
UNIPROT:
 P77147


Operon      
Name: ydhYVWXUT         
Operon arrangement:
Transcription unit        Promoter
ydhYVWXUT
ydhXUT
ydhYVW


Transcriptional Regulation      
Display Regulation             
Activated by: FNR
Repressed by: NarL, NarP


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter ydhTp1 1749569 reverse nd [COMP-AINF] [2]


Evidence    

 [COMP-AINF] Inferred computationally without human oversight


Reference(s)    

 [1] Awad A Al Ibrahim N., Green J., 2017, Regulation of the Escherichia coli ydhY-T operon in the presence of alternative electron acceptors., Microbiology 163(4):584-594

 [2] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78

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