RegulonDB RegulonDB 11.1: Gene Form
   

yegX gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yegX thiD yegW yegV thiM terminator yegXp6 yegXp6 yegXp1 yegXp1

Gene      
Name: yegX    Texpresso search in the literature
Synonym(s): ECK2095, G7134, b2102
Genome position(nucleotides): 2182833 <-- 2183651
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 47.99
External database links:  
ASAP:
 ABE-0006955
ECHOBASE:
 EB3820
ECOLIHUB:
 yegX
OU-MICROARRAY:
 b2102
STRING:
 511145.b2102
COLOMBOS: yegX


Product      
Name: putative glycosyl hydrolase YegX
Synonym(s): YegX
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 31.604
Isoelectric point: 9.867
Motif(s):
 
Type Positions Sequence Comment
70 -> 245 IDVSRWQERIDWQRVAKMRDNGIRLQFAFIKATEGEKLVDPYFSRNWQLSRENGLLRGAYHYFSPSVSASVQARLFLQTVDFSQGDFPAVLDVEERGKLSAKELRKRVSQWLKMVEKSTGKKPIIYSGAVFYHTNLAGYFNEYPWWVAHYYQRRPDNDGMAWRFWQHSDRGQVDGI

 
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
molecular_function GO:0016787 - hydrolase activity
GO:0016798 - hydrolase activity, acting on glycosyl bonds
GO:0003796 - lysozyme activity
biological_process GO:0008152 - metabolic process
GO:0044275 - cellular carbohydrate catabolic process
GO:0009253 - peptidoglycan catabolic process
GO:0016998 - cell wall macromolecule catabolic process
Note(s): Note(s): ...[more].
External database links:  
ALPHAFOLD:
 P76421
CAZY:
 GH25
ECOCYC:
 G7134-MONOMER
ECOLIWIKI:
 b2102
INTERPRO:
 IPR002053
INTERPRO:
 IPR008270
INTERPRO:
 IPR017853
INTERPRO:
 IPR018077
MODBASE:
 P76421
PFAM:
 PF01183
PRIDE:
 P76421
PROSITE:
 PS00953
PROSITE:
 PS51904
REFSEQ:
 NP_416605
SMART:
 SM00641
SMR:
 P76421
UNIPROT:
 P76421


Operon      
Name: yegX         
Operon arrangement:
Transcription unit        Promoter
yegX


RNA cis-regulatory element    
Attenuation: Translational


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter yegXp1 2183801 reverse nd [COMP-AINF] [1]
  promoter yegXp6 2183820 reverse nd [COMP-AINF] [1]


Evidence    

 [COMP-AINF] Inferred computationally without human oversight


Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78

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