RegulonDB RegulonDB 11.1: Gene Form
   

yeiS gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

preT sanA yeiS preA CRP TSS_2455 TSS_2455 preTp preTp

Gene      
Name: yeiS    Texpresso search in the literature
Synonym(s): ECK2138, G7144, b2145
Genome position(nucleotides): 2233600 --> 2233839
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 42.92
External database links:  
ASAP:
 ABE-0007093
ECHOBASE:
 EB3826
ECOLIHUB:
 yeiS
OU-MICROARRAY:
 b2145
STRING:
 511145.b2145
COLOMBOS: yeiS


Product      
Name: DUF2542 domain-containing protein YeiS
Synonym(s): YeiS
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 9.264
Isoelectric point: 10.072
Motif(s):
 
Type Positions Sequence Comment
1 -> 79 MDVQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVYVWRAKNPGLFFAYMVAYIGFGILSIGMIVYLIFYR
53 -> 73 LFFAYMVAYIGFGILSIGMIV UniProt: Helical.

 
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0016021 - integral component of membrane
Note(s): Note(s): ...[more].
External database links:  
ALPHAFOLD:
 P64536
ECOCYC:
 G7144-MONOMER
ECOLIWIKI:
 b2145
INTERPRO:
 IPR020155
PFAM:
 PF10808
PRIDE:
 P64536
REFSEQ:
 NP_416650
UNIPROT:
 P64536


Operon      
Name: sanA-yeiS         
Operon arrangement:
Transcription unit        Promoter
sanA-yeiS


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter TSS_2455 2234353 forward nd [RS-EPT-CBR] [1]


Evidence    

 [RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates


Reference(s)    

 [1] Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muñiz-Rascado L, García-Sotelo JS, Weiss V, Solano-Lira H, Martínez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernández S, Alquicira-Hernández K, López-Fuentes A, Porrón-Sotelo L, Huerta AM, Bonavides-Martínez C, Balderas-Martínez YI, Pannier L, Olvera M, Labastida A, Jiménez-Jacinto V, Vega-Alvarado L, Del Moral-Chávez V, Hernández-Alvarez A, Morett E, Collado-Vides J., 2012, RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more., Nucleic Acids Res.

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