RegulonDB RegulonDB 10.9: Gene Form
   

yffN gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yffO yffN yffM yffP yffOp1 yffOp1 yffOp yffOp yffOp7 yffOp7 yffOp8 yffOp8

Gene      
Name: yffN    Texpresso search in the literature
Synonym(s): ECK2440, G7275, b2445
Genome position(nucleotides): 2561625 --> 2561993 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
46.61
External database links:  
ASAP:
ABE-0008063
ECHOBASE:
EB3927
ECOLIHUB:
yffN
OU-MICROARRAY:
b2445
STRING:
511145.b2445
COLOMBOS: yffN


Product      
Name: CPZ-55 prophage; uncharacterized protein YffN
Synonym(s): YffN
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 13.778
Isoelectric point: 4.457
Classification:
Multifun Terms (GenProtEC)  
  8 - extrachromosomal --> 8.1 - prophage genes and phage related functions
Gene Ontology Terms (GO)  
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
G7275-MONOMER
ECOLIWIKI:
b2445
PRIDE:
P76545
REFSEQ:
NP_416940
SMR:
P76545
UNIPROT:
P76545


Operon      
Name: yffMN         
Operon arrangement:
Transcription unit        Promoter
yffMN


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter yffOp8 2561902 forward Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter yffOp7 2561993 forward Similarity to the consensus
Read more >
[ICWHO] [1]
  promoter yffOp1 2562080 forward Similarity to the consensus
Read more >
[ICWHO] [1]


Evidence    

 [ICWHO] Inferred computationally without human oversight



Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78


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