RegulonDB RegulonDB 10.10: Gene Form
   

yjfJ gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yjfJ yjfK yjfI terminator anti-terminator anti-anti-terminator

Gene      
Name: yjfJ    Texpresso search in the literature
Synonym(s): ECK4178, G7847, b4182
Genome position(nucleotides): 4410553 --> 4411251 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
51.36
External database links:  
ASAP:
ABE-0013689
ECHOBASE:
EB2378
ECOLIHUB:
yjfJ
OU-MICROARRAY:
b4182
STRING:
511145.b4182
COLOMBOS: yjfJ


Product      
Name: PspA family protein YjfJ
Synonym(s): YjfJ, putative transcriptional regulator effector protein
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 25.334
Isoelectric point: 5.525
Motif(s):
 
Type Positions Sequence
19 -> 232 EESIEETQGVRMLEQHIRDAKAELDKAGKSRVDLLARVKLSHDKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARLENLITAEEQVLSNLEVSRDGVEKAVTATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTVGASSSVSTAAESLKRLQTRQAERQARLDAAAQLEKVADGRDLDEKLAEAGIGGSNKSSAQDVLARLQRQQGE
1 -> 18 MGILKSLFTLGKSFISQA
2 -> 232 GILKSLFTLGKSFISQAEESIEETQGVRMLEQHIRDAKAELDKAGKSRVDLLARVKLSHDKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARLENLITAEEQVLSNLEVSRDGVEKAVTATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTVGASSSVSTAAESLKRLQTRQAERQARLDAAAQLEKVADGRDLDEKLAEAGIGGSNKSSAQDVLARLQRQQGE

 

Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
molecular_function GO:0042802 - identical protein binding
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
G7847-MONOMER
ECOLIWIKI:
b4182
INTERPRO:
IPR007157
PANTHER:
PTHR31088
PFAM:
PF04012
PRIDE:
P0AF78
REFSEQ:
NP_418603
SMR:
P0AF78
UNIPROT:
P0AF78


Operon      
Name: nsrR-rnr-rlmB-yjfIJ         
Operon arrangement:
Transcription unit        Promoter
nsrR-rnr-rlmB-yjfI
yjfIJ


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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