RegulonDB RegulonDB 11.1: Gene Form
   

ykiC gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

yaiP tauA yaiS ykiC CysB Cbl CysB CysB terminator tauAp tauAp yaiSp14 yaiSp14 yaiSp13 yaiSp13 yaiSp9 yaiSp9 yaiSp12 yaiSp12 yaiPp5 yaiPp5

Gene      
Name: ykiC    Texpresso search in the literature
Synonym(s): ECK4588, G0-16726, b4731
Genome position(nucleotides): 383960 --> 384079
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 43.33


Product      
Name: protein YkiC
Synonym(s): YkiC
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane
Molecular weight: 4.432
Isoelectric point: 8.229
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0016021 - integral component of membrane
Note(s): Note(s): ...[more].
External database links:  
ALPHAFOLD:
 P0DPN1
ECOCYC:
 MONOMER0-4408
UNIPROT:
 P0DPN1


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter yaiPp5 383985 reverse nd [COMP-AINF] [1]
  promoter yaiSp12 384701 reverse nd [COMP-AINF] [1]
  promoter yaiSp9 384708 reverse nd [COMP-AINF] [1]
  promoter yaiSp13 384738 reverse nd [COMP-AINF] [1]
  promoter yaiSp14 384830 reverse nd [COMP-AINF] [1]


Evidence    

 [COMP-AINF] Inferred computationally without human oversight


Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78

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