RegulonDB RegulonDB 10.9: Gene Form
   

argL gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

argF xynR ykgS argL ArgR ArgR anti-anti-terminator anti-terminator terminator argFp argFp TSS_470 TSS_470 yagIp1 yagIp1

Gene      
Name: argL    Texpresso search in the literature
Synonym(s): ECK4623, G0-17012, b4766
Genome position(nucleotides): 290275 <-- 290370 Genome Browser
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
30.21


Product      
Name: putative translational regulatory protein ArgL
Synonym(s): ArgL
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 3.681
Isoelectric point: 10.452
Classification:
Multifun Terms (GenProtEC)  
  3 - regulation
Gene Ontology Terms (GO)  
biological_process GO:0006417 - regulation of translation
GO:0048523 - negative regulation of cellular process
Note(s): Note(s): ...[more].
Evidence: [IMP] Inferred from mutant phenotype
Reference(s): [1] Weaver J., et al., 2019
External database links:  
ECOCYC:
MONOMER0-4479
UNIPROT:
P0DSE4


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter yagIp1 289192 reverse Similarity to the consensus
Read more >
[ICWHO] [2]
  promoter TSS_470 290115 reverse nd [RS-EPT-CBR] [3]


Evidence    

 [ICWHO] Inferred computationally without human oversight

 [RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates



Reference(s)    

 [1] Weaver J., Mohammad F., Buskirk AR., Storz G., 2019, Identifying Small Proteins by Ribosome Profiling with Stalled Initiation Complexes., MBio 10(2)

 [2] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78

 [3] Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muñiz-Rascado L, García-Sotelo JS, Weiss V, Solano-Lira H, Martínez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernández S, Alquicira-Hernández K, López-Fuentes A, Porrón-Sotelo L, Huerta AM, Bonavides-Martínez C, Balderas-Martínez YI, Pannier L, Olvera M, Labastida A, Jiménez-Jacinto V, Vega-Alvarado L, Del Moral-Chávez V, Hernández-Alvarez A, Morett E, Collado-Vides J., 2012, RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more., Nucleic Acids Res.


RegulonDB