RegulonDB RegulonDB 10.9: Gene Form
   

yqiM gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

exuR yqjA yqiM CpxR TSS_3400 (cluster) TSS_3400 (cluster) TSS_3399 (cluster) TSS_3399 (cluster) TSS_3398 TSS_3398 TSS_3397 TSS_3397 TSS_3396 TSS_3396 TSS_3395 TSS_3395 TSS_3394 TSS_3394 TSS_3393 TSS_3393 yqjAp2 yqjAp2 TSS_3392 (cluster) TSS_3392 (cluster) yqjAp1 yqjAp1

Gene      
Name: yqiM    Texpresso search in the literature
Synonym(s): ECK4644, G0-17033, b4787
Genome position(nucleotides): 3247668 --> 3247751 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
41.67


Product      
Name: protein YqiM
Synonym(s): YqiM
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 3.305
Isoelectric point: 11.477
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
MONOMER0-4499
UNIPROT:
P0DSG5


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter TSS_3392 (cluster) 3247549 forward For this promoter, there
Read more >
[RS-EPT-CBR] [1]
  promoter TSS_3393 3247928 forward nd [RS-EPT-CBR] [1]
  promoter TSS_3394 3248132 forward nd [RS-EPT-CBR] [1]
  promoter TSS_3395 3248267 forward nd [RS-EPT-CBR] [1]
  promoter TSS_3396 3248277 forward nd [RS-EPT-CBR] [1]
  promoter TSS_3397 3248288 forward nd [RS-EPT-CBR] [1]
  promoter TSS_3398 3248312 forward nd [RS-EPT-CBR] [1]
  promoter TSS_3399 (cluster) 3248314 forward For this promoter, there
Read more >
[RS-EPT-CBR] [1]
  promoter TSS_3400 (cluster) 3248319 forward For this promoter, there
Read more >
[RS-EPT-CBR] [1]


Evidence    

 [RS-EPT-CBR] RNA-seq using two enrichment strategies for primary transcripts and consistent biological replicates



Reference(s)    

 [1] Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muñiz-Rascado L, García-Sotelo JS, Weiss V, Solano-Lira H, Martínez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernández S, Alquicira-Hernández K, López-Fuentes A, Porrón-Sotelo L, Huerta AM, Bonavides-Martínez C, Balderas-Martínez YI, Pannier L, Olvera M, Labastida A, Jiménez-Jacinto V, Vega-Alvarado L, Del Moral-Chávez V, Hernández-Alvarez A, Morett E, Collado-Vides J., 2012, RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more., Nucleic Acids Res.


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