RegulonDB RegulonDB 11.1: Gene Form
   

racC gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

recE racC ydaE recT racCp6 racCp6 racCp4 racCp4

Gene      
Name: racC    Texpresso search in the literature
Synonym(s): ECK1348, EG10813, b1351, sbcA
Genome position(nucleotides): 1417488 <-- 1417763
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 39.13
External database links:  
ASAP:
 ABE-0004533
CGSC:
 32076
ECHOBASE:
 EB0806
ECOLIHUB:
 racC
OU-MICROARRAY:
 b1351
STRING:
 511145.b1351
COLOMBOS: racC


Product      
Name: Rac prophage; protein RacC
Synonym(s): RacC, SbcA
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 10.016
Isoelectric point: 5.728
Classification:
Multifun Terms (GenProtEC)  
  8 - extrachromosomal --> 8.1 - prophage genes and phage related functions
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
Note(s): Note(s): ...[more].
External database links:  
ALPHAFOLD:
 P15033
ECOCYC:
 EG10813-MONOMER
ECOLIWIKI:
 b1351
PRIDE:
 P15033
PRODB:
 PRO_000023673
REFSEQ:
 NP_415867
SMR:
 P15033
UNIPROT:
 P15033


Operon      
Name: racC         
Operon arrangement:
Transcription unit        Promoter
racC


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter racCp4 1417811 reverse nd [COMP-AINF] [1]
  promoter racCp6 1417815 reverse nd [COMP-AINF] [1]


Evidence    

 [COMP-AINF] Inferred computationally without human oversight


Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78

RegulonDB