RegulonDB RegulonDB 10.9: Gene Form
   

atoB gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

atoE atoB yfaP atoA

Gene      
Name: atoB    Texpresso search in the literature
Synonym(s): ECK2217, EG11672, b2224
Genome position(nucleotides): 2326109 --> 2327293 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 53.0
External database links:  
ASAP:
 ABE-0007355
CGSC:
 985
ECHOBASE:
 EB1623
ECOLIHUB:
 atoB
OU-MICROARRAY:
 b2224
STRING:
 511145.b2224
COLOMBOS: atoB


Product      
Name: acetyl-CoA acetyltransferase
Synonym(s): AtoB
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 40.352
Isoelectric point: 7.102
Motif(s):
 
Type Positions Sequence
270 -> 392 LTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIER
4 -> 263 CVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKANSTAEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEES

 
Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.1 - carbon utilization --> 1.1.2 - fatty acids
  6 - cell structure --> 6.1 - membrane
Gene Ontology Terms (GO)  
cellular_component GO:0005737 - cytoplasm
GO:0005829 - cytosol
GO:0032991 - protein-containing complex
molecular_function GO:0016740 - transferase activity
GO:0003985 - acetyl-CoA C-acetyltransferase activity
GO:0016746 - transferase activity, transferring acyl groups
GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups
GO:0003988 - acetyl-CoA C-acyltransferase activity
GO:0042802 - identical protein binding
biological_process GO:0006629 - lipid metabolic process
GO:0006631 - fatty acid metabolic process
GO:0006635 - fatty acid beta-oxidation
GO:0043442 - acetoacetic acid catabolic process
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
 ACETYL-COA-ACETYLTRANSFER-MONOMER
ECOLIWIKI:
 b2224
INTERPRO:
 IPR020615
INTERPRO:
 IPR020613
INTERPRO:
 IPR020610
INTERPRO:
 IPR016039
INTERPRO:
 IPR020616
INTERPRO:
 IPR020617
INTERPRO:
 IPR002155
MODBASE:
 P76461
PDB:
 5F0V
PDB:
 5F38
PDB:
 4WYS
PFAM:
 PF00108
PFAM:
 PF02803
PRIDE:
 P76461
PRODB:
 PRO_000022181
PROSITE:
 PS00737
PROSITE:
 PS00099
PROSITE:
 PS00098
REFSEQ:
 NP_416728
SMR:
 P76461
SWISSMODEL:
 P76461
UNIPROT:
 P76461


Operon      
Name: atoDAEB         
Operon arrangement:
Transcription unit        Promoter
atoDAEB


Transcriptional Regulation      
Display Regulation             
Activated by: AtoC, IHF


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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