RegulonDB RegulonDB 11.1: Gene Form
   

ybjC gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

rimK nfsA ybjC grxA SoxS Rob MarA OxyR SoxS OxyR OxyR SdsN rimKp rimKp ybjCp ybjCp grxAp grxAp

Gene      
Name: ybjC    Texpresso search in the literature
Synonym(s): ECK0841, EG12842, b0850
Genome position(nucleotides): 890913 --> 891200
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 50.35
External database links:  
ASAP:
 ABE-0002898
ECHOBASE:
 EB2691
ECOLIHUB:
 ybjC
OU-MICROARRAY:
 b0850
STRING:
 511145.b0850
COLOMBOS: ybjC


Product      
Name: DUF1418 domain-containing protein YbjC
Synonym(s): YbjC
Sequence: Get amino acid sequence Fasta Format
Cellular location: membrane
Molecular weight: 10.521
Isoelectric point: 10.014
Motif(s):
 
Type Positions Sequence Comment
1 -> 92 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAAVVVILQVAKRLAPQLMNRPPQYSRSEREKDND

 
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0016020 - membrane
biological_process GO:1901422 - response to butan-1-ol
GO:1901562 - response to paraquat
Note(s): Note(s): ...[more].
External database links:  
ALPHAFOLD:
 P46119
ECOCYC:
 EG12842-MONOMER
ECOLIWIKI:
 b0850
INTERPRO:
 IPR010815
PFAM:
 PF07214
PRIDE:
 P46119
REFSEQ:
 NP_415371
UNIPROT:
 P46119


Operon      
Name: ybjC-nfsA-rimK-ybjN         
Operon arrangement:
Transcription unit        Promoter
ybjC-nfsA-rimK-ybjN
rimK-ybjN
ybjN


Transcriptional Regulation      
Display Regulation             
Activated by: MarA, Rob, SoxS
Repressed by: OxyR


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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