RegulonDB RegulonDB 10.9: Gene Form
   

ydiT gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

fadK ydiS ydiR ydiT terminator

Gene      
Name: ydiT    Texpresso search in the literature
Synonym(s): ECK1698, G6923, b1700
Genome position(nucleotides): 1782681 --> 1782974 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
47.96
External database links:  
ASAP:
ABE-0005674
ECHOBASE:
EB3736
ECOLIHUB:
ydiT
OU-MICROARRAY:
b1700
STRING:
511145.b1700
COLOMBOS: ydiT


Product      
Name: ferredoxin-like protein YdiT
Synonym(s): YdiT, putative 4Fe-4S ferredoxin-type protein
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 10.724
Isoelectric point: 5.448
Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.1 - carbon utilization --> 1.1.2 - fatty acids
  1 - metabolism --> 1.4 - energy production/transport --> 1.4.3 - electron carriers
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
molecular_function GO:0046872 - metal ion binding
GO:0051536 - iron-sulfur cluster binding
GO:0005506 - iron ion binding
biological_process GO:0055114 - oxidation-reduction process
Note(s): Note(s): ...[more].
Evidence: [IHBCE] Inferred by a human based on computational evidence
Reference(s): [1] Campbell JW., et al., 2003
External database links:  
ECOCYC:
G6923-MONOMER
ECOLIWIKI:
b1700
INTERPRO:
IPR012206
INTERPRO:
IPR017900
PANTHER:
PTHR43082
PRIDE:
P77714
PROSITE:
PS00198
REFSEQ:
NP_416215
UNIPROT:
P77714


Operon      
Name: ydiQRST-fadK         
Operon arrangement:
Transcription unit        Promoter
ydiQRST-fadK


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Campbell JW., Morgan-Kiss RM., E Cronan J., 2003, A new Escherichia coli metabolic competency: growth on fatty acids by a novel anaerobic beta-oxidation pathway., Mol Microbiol 47(3):793-805


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