RegulonDB RegulonDB 10.10: Gene Form
   

yeeS gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

flu yeeR yeeS yeeT

Gene      
Name: yeeS    Texpresso search in the literature
Synonym(s): ECK1995, G7082, b2002
Genome position(nucleotides): 2076308 --> 2076754 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 58.17
External database links:  
ASAP:
 ABE-0006650
ECHOBASE:
 EB3167
ECOLIHUB:
 yeeS
OU-MICROARRAY:
 b2002
STRING:
 511145.b2002
COLOMBOS: yeeS


Product      
Name: CP4-44 prophage; RadC-like JAB domain-containing protein YeeS
Synonym(s): YeeS
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 16.557
Isoelectric point: 8.024
Motif(s):
 
Type Positions Sequence
26 -> 148 AFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL
28 -> 147 TSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGL
97 -> 110 HNHPSGEVTPSKAD

 
Classification:
Multifun Terms (GenProtEC)  
  8 - extrachromosomal --> 8.1 - prophage genes and phage related functions
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
molecular_function GO:0008233 - peptidase activity
GO:0016787 - hydrolase activity
GO:0046872 - metal ion binding
GO:0008237 - metallopeptidase activity
biological_process GO:0006508 - proteolysis
Note(s): Note(s): ...[more].
External database links:  
ECOCYC:
 G7082-MONOMER
ECOLIWIKI:
 b2002
INTERPRO:
 IPR037518
INTERPRO:
 IPR025657
INTERPRO:
 IPR020891
INTERPRO:
 IPR001405
PANTHER:
 PTHR30471
PFAM:
 PF04002
PRIDE:
 P76362
PROSITE:
 PS01302
PROSITE:
 PS50249
REFSEQ:
 NP_416506
SMR:
 P76362
UNIPROT:
 P76362


Operon      
Name: yeeRST-cbeA-cbtA-yeeW         
Operon arrangement:
Transcription unit        Promoter
yeeRST-cbeA-cbtA-yeeW


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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