RegulonDB RegulonDB 10.9: Gene Form
   

ssnA gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

ygfK ssnA ygfM xdhD terminator ssnAp ssnAp

Gene      
Name: ssnA    Texpresso search in the literature
Synonym(s): ECK2875, G7498, b2879, ygfL
Genome position(nucleotides): 3019161 --> 3020489 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
52.67
External database links:  
ASAP:
ABE-0009452
ECHOBASE:
EB2874
ECOLIHUB:
ssnA
OU-MICROARRAY:
b2879
STRING:
511145.b2879
COLOMBOS: ssnA


Product      
Name: putative aminohydrolase SsnA
Synonym(s): SsnA, YgfL
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 48.842
Isoelectric point: 6.249
Motif(s):
 
Type Positions Sequence
53 -> 410 IVMPGIVCSHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHVGYNHHLSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSVHSVMVNGVMV

 

Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
molecular_function GO:0016787 - hydrolase activity
GO:0046872 - metal ion binding
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
biological_process GO:0030308 - negative regulation of cell growth
Note(s): Note(s): ...[more].
Evidence: [HIFS] Human inference of function from sequence
Reference(s): [1] Xi H., et al., 2000
External database links:  
DIP:
DIP-10923N
ECOCYC:
G7498-MONOMER
ECOLIWIKI:
b2879
INTERPRO:
IPR011059
INTERPRO:
IPR032466
INTERPRO:
IPR017700
INTERPRO:
IPR006680
MODBASE:
Q46812
PFAM:
PF01979
PRIDE:
Q46812
PRODB:
PRO_000023991
REFSEQ:
NP_417355
SMR:
Q46812
UNIPROT:
Q46812


Operon      
Name: ygfK-ssnA         
Operon arrangement:
Transcription unit        Promoter
ygfK-ssnA
ssnA


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Xi H., Schneider BL., Reitzer L., 2000, Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage., J Bacteriol 182(19):5332-41


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