RegulonDB RegulonDB 11.1: Gene Form
   

hyaE gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

appC hyaF hyaC hyaD hyaE YdeO appCp2 appCp2 appCp appCp

Gene      
Name: hyaE    Texpresso search in the literature
Synonym(s): ECK0967, EG10472, b0976
Genome position(nucleotides): 1036354 --> 1036752
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 56.64
External database links:  
ASAP:
 ABE-0003294
CGSC:
 31794
ECHOBASE:
 EB0467
ECOLIHUB:
 hyaE
OU-MICROARRAY:
 b0976
STRING:
 511145.b0976
COLOMBOS: hyaE


Shine dalgarno      
Sequence: gatgacacagGAGGAGcagggATG


Product      
Name: putative HyaA chaperone
Synonym(s): HyaE
Sequence: Get amino acid sequence Fasta Format
Cellular location: cytosol
Molecular weight: 14.89
Isoelectric point: 4.253
Motif(s):
 
Type Positions Sequence Comment
10 -> 116 LWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLREFPDYTWQVAIADLEQSEAIGDRFGVFRFPATLVFTGGNYRGVLNGIHPWAEL

 
Classification:
Multifun Terms (GenProtEC)  
  1 - metabolism --> 1.3 - energy metabolism, carbon --> 1.3.6 - aerobic respiration
  1 - metabolism --> 1.3 - energy metabolism, carbon --> 1.3.7 - anaerobic respiration
  2 - information transfer --> 2.3 - protein related --> 2.3.4 - chaperoning, repair (refolding)
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
molecular_function GO:0005048 - signal sequence binding
Note(s): Note(s): ...[more].
Evidence: [EXP-IPI] Inferred from physical interaction
Reference(s): [1] Dubini A., et al., 2003
External database links:  
ALPHAFOLD:
 P19931
DIP:
 DIP-9961N
ECOCYC:
 EG10472-MONOMER
ECOLIWIKI:
 b0976
INTERPRO:
 IPR010893
INTERPRO:
 IPR036249
PDB:
 2HFD
PFAM:
 PF07449
PRIDE:
 P19931
PRODB:
 PRO_000022946
REFSEQ:
 NP_415495
SMR:
 P19931
SWISSMODEL:
 P19931
UNIPROT:
 P19931


Operon      
Name: hyaABCDEF         
Operon arrangement:
Transcription unit        Promoter
hyaABCDEF
hyaABCDEF


Transcriptional Regulation      
Display Regulation             
Activated by: YdeO, ArcA, AppY
Repressed by: IscR, NarL, NarP, Fis


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References


Reference(s)    

 [1] Dubini A., Sargent F., 2003, Assembly of Tat-dependent [NiFe] hydrogenases: identification of precursor-binding accessory proteins., FEBS Lett 549(1-3):141-6

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